Pyrobaculum neutrophilum: Tneu_1593
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Entry
Tneu_1593 CDS
T00682
Name
(GenBank) Xylose isomerase domain protein TIM barrel
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tne
Pyrobaculum neutrophilum
Pathway
tne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tneu_1593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tne03400
]
Tneu_1593
Enzymes [BR:
tne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Tneu_1593
DNA repair and recombination proteins [BR:
tne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Tneu_1593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
ComA
UvdE
PV-1
Motif
Other DBs
NCBI-ProteinID:
ACB40516
UniProt:
B1Y9W6
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All DBs
Position
complement(1408205..1409035)
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AA seq
276 aa
AA seq
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MAKVYLGPAGIPQYVVKAKSTLDAVKAVRELGLNAMEVEFVQGVRMSRELAKQVGKAAQD
YDVKLSVHAPYFINLCSEEADKVEKSRQRLVDSLDRAYHMGAWVVVVHAAYYGKLGPQRC
FEKVKEELEKAYRESGIGSGVYIGVEITARTNQFGSVEEAFKLAKELHYVTPVVDWGHLY
ARNNGVINYGEVLDLWAREFGDRHMHTHFTSVRYRNGKYVDEHEPIERNMPPFEPLAEEL
KRRDLAITLICESPLLEKDALLMKEILEKHGVSLAT
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggtctacctgggcccagccggcattcctcaatacgtcgtaaaggcgaagtcc
acgctagacgcggtaaaagcagtgagggagctgggcctcaacgccatggaggtggagttc
gtacagggggtgaggatgtcgagggagttggcgaagcaggtggggaaggcggctcaggac
tacgacgtcaagctctccgtgcacgccccctacttcatcaacctgtgttccgaagaggcg
gataaggtggagaaatctcggcagaggctggtggattcgctagacagagcatatcacatg
ggcgcttgggttgtggtcgtccacgccgcgtactacgggaagttgggtccccagaggtgc
ttcgagaaagtcaaggaggagttggagaaggcgtatagggagtccgggatcggatccggc
gtgtatataggcgtggagatcacagccaggacaaaccagttcggaagcgtagaggaggcg
tttaagctcgcaaaggagctacattacgtaacgccggtggtggactggggccacctctac
gccagaaacaacggagttataaactacggagaagtcctagacctctgggcgagggagttc
ggagatagacatatgcacacacacttcacctccgtccgctaccgaaacgggaagtacgtg
gacgaacacgagcccatagagcgaaacatgccgccgtttgagccgctggctgaggagctc
aagaggagggatctcgcgataaccctaatctgcgaatcgccgcttttggaaaaagatgcg
ctcctgatgaaggagatcctcgaaaaacacggcgttagccttgccacataa
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