Pyrobaculum neutrophilum: Tneu_1619
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Entry
Tneu_1619 CDS
T00682
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tne
Pyrobaculum neutrophilum
Pathway
tne04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Tneu_1619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tne03019
]
Tneu_1619
03009 Ribosome biogenesis [BR:
tne03009
]
Tneu_1619
04131 Membrane trafficking [BR:
tne04131
]
Tneu_1619
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tne04147
]
Tneu_1619
Messenger RNA biogenesis [BR:
tne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Tneu_1619
Ribosome biogenesis [BR:
tne03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Tneu_1619
Membrane trafficking [BR:
tne04131
]
SNARE
SNARE associated proteins
Others
Tneu_1619
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Tneu_1619
Exosome [BR:
tne04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tneu_1619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
Vps4_C
TIP49
AAA_28
IstB_IS21
nSTAND3
AAA_18
Mg_chelatase
RNA_helicase
AAA_24
Sigma54_activat
MazE_antitoxin
AAA_7
TsaE
AAA_17
ABC_tran
DUF815
ATPase
PhoH
AAA_19
Zeta_toxin
NPHP3_N
Parvo_NS1
SLFN-g3_helicase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACB40542
UniProt:
B1Y9Z2
LinkDB
All DBs
Position
1432691..1434904
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AA seq
737 aa
AA seq
DB search
MSEVILKVAEAKSRDVGRSIVRIPVRIMKKLGIEPGDYVEIFGRKSAYAQVWPAYPEDED
KDVIRMDGIIRQNAGVGIGDTVKVKKAVLKSAQRVVLAPTEPVRVDPEYLKKQVLLGKPV
ARGQAIDVPFYGGAIRFVVVQVQPGPAAYVSIDTEVAVREEPVKEAELTIPRVTWEDIGD
LEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVA
INGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQL
LTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRFDREIHIPMPDKRARREILAVHTRNM
PLCTKADVENKICAQGEEVDLDKIAEMTHGYTGADLAALAKEAAMAALRKAMNRGMINVE
LDVIPQEVLNKLKVGMSDFQEAMKYVHPTVLREVIIEVPEVRWDDIGGYETIKQELREIV
EWPMKYKHYFDELGVEPPKGILLFGPPGVGKTLFAKAVATESGANFIAVRGPELLSKWVG
ESEKAIREVFKRARMAAPCVIFFDEIDSIAPARGSRLGDSGVTDRMVNQLLAEMDGIGTL
KNVVVMAATNRPDILDPALLRPGRFDRVIYVPPPDLKARVEILKVHTKRIKLGDDVNLEE
LAKRTEGYTGADLAAVVREAAMLALRETIKERSVKAKPVSAKHFEEALKRIPPSLTPEDI
RRYEEMAKRVRRAIAGL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggtcattctcaaggtggctgaggctaagtcgcgcgacgtgggtagaagcatc
gtcagaatccccgtccgcataatgaagaagctcggcatagagccaggagactacgtggag
attttcggtaggaagtccgcctacgcccaggtgtggccggcgtatccggaggacgaggat
aaggacgtcattaggatggacggcatcattaggcagaacgcgggcgtcggcataggagac
accgtgaaggttaagaaggccgtcttgaaatcggcgcagagggttgtcttggcgcccacg
gagcccgtcagagtagacccggagtatctcaagaagcaggtgctcctcggcaaaccggtg
gccaggggacaggccatagacgtgcccttctacggcggcgccatcagattcgtcgtggtg
caggtgcagcccggcccggcggcctacgtctccatagacacagaggtggcggtgcgggag
gagcctgtgaaggaggccgagctgacgatccctagggtcacctgggaggatattggtgat
ttggaggatgctaagcagaagattcgtgagcttgtggagcttcctcttaggcatcctgag
ttgtttaagcatttgggtattgagcctccgaagggtatcctcttgattggccctccgggc
actggcaagaccctcctcgccaaggctgtggctaacgaggctaacgcctacttcgtcgcc
ataaacggccccgagatcatgtctaagtactacggcgagtcagaggcgcggcttagggag
atcttcgaagaggcgaagaagaacgcccccgccataatcttcatagacgagatagacgcc
atagcccccaaacgcgaggaggtcacgggggaggtggagaagcgggtggtggcccagcta
ctaaccctaatggacgggctacaagagagaggacaggtagtggtaataggagcaaccaac
cgcccagacgcagtagacccagcgttgagaagaccaggaagattcgacagagagatccac
atacccatgccggacaagagagccagacgcgagattctggcagtacacacgcgcaacatg
cctctttgtacaaaagccgacgtggagaacaaaatctgtgcacagggggaggaggtggat
ctagacaaaatcgctgagatgacccacggctacaccggcgcggatctcgcggcgcttgca
aaagaggccgccatggcggcgttaagaaaggccatgaacagggggatgataaacgttgag
ctagacgtcattccacaagaggttttgaacaaactgaaggtcgggatgtccgacttccaa
gaggctatgaagtacgtccaccccaccgtgttgagggaggtcatcatcgaggtgcccgag
gtgcgttgggacgacatcggggggtacgaaaccataaaacaagagctgagggagatagtg
gagtggcctatgaagtataaacactacttcgacgagcttggcgttgagcctcctaagggc
atactgctctttgggccgcccggcgttgggaagacgttgtttgcgaaggcggtggccacc
gagtccggcgccaacttcatcgcagtaagggggcccgagctcctctccaagtgggttggc
gaatctgagaaggccatacgcgaggtcttcaagcgggcgcgaatggcggccccctgcgtt
attttcttcgacgagatagactcgatagcgcctgcaagagggtcccggctgggcgactcg
ggggttacggacaggatggtaaaccagctactcgcggagatggacggaatcgggacgctc
aaaaacgtggttgtcatggccgccacaaacaggccggatatactggacccggcgttgctg
aggcccggccgcttcgacagagtcatctacgtccctccgcccgacctaaaggcgagagtt
gagatactcaaggtacacaccaagaggataaagctgggggacgacgtaaacctagaggag
ctggcgaagaggacagagggctacaccggcgcagacctcgccgcagtcgtgagggaggcg
gcaatgctagcgctgagagagacaattaaggagaggtctgtaaaggctaagccggtttct
gccaagcacttcgaggaagctctaaagaggataccgccgtcgcttaccccagaggacata
aggcgctacgaggagatggccaagagggtaagacgggctatagccgggctttag
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