Pyrobaculum neutrophilum: Tneu_1737
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Entry
Tneu_1737 CDS
T00682
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tne
Pyrobaculum neutrophilum
Pathway
tne03022
Basal transcription factors
tne03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Tneu_1737
09124 Replication and repair
03420 Nucleotide excision repair
Tneu_1737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tne03021
]
Tneu_1737
03036 Chromosome and associated proteins [BR:
tne03036
]
Tneu_1737
03400 DNA repair and recombination proteins [BR:
tne03400
]
Tneu_1737
Enzymes [BR:
tne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Tneu_1737
Transcription machinery [BR:
tne03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Tneu_1737
Chromosome and associated proteins [BR:
tne03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Tneu_1737
DNA repair and recombination proteins [BR:
tne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Tneu_1737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
nSTAND3
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACB40655
UniProt:
B1YAK6
LinkDB
All DBs
Position
complement(1529850..1531574)
Genome browser
AA seq
574 aa
AA seq
DB search
MEPFPYGEFRPRQREIFERVYETLTAGGVLLINAPTGLGKTAAVLSAAVKYIAEGGGAVH
YVVRTRSELEPPVRELSRIIQRGFGVDYAVIKSRQDMCCYPQLRRLSYLEFLAECNLLRS
SGRCAYYPPRDVETPLKSVDAYVRFLCAAGSCPYEYAKERLARASLVISTYYYVFGRERP
ALWNKAVIVDEAHSLFEAVAHLHAVEIPESEVRAAYREAKKFGFLEEAAKIYGVLTFIRR
TSGVIEVGDVLGLVGDLELDAAILEISRRKAERRLNPYTPLLLLKELREALRSGVRYFGE
VKDGEGGRRLVLQPLDPATLVKNALRGVKSVVYLSGTLPVELFAEALGEAKYRYVDIPFG
EYIPRQNYLAVVDIGVTTRYGERGEEMYVEIARRLAHAINISPGGVLAVFPSYEVLKGVK
KYLRISIPHWYEGGEAGLGDLPDKFFIGAVARGRYTEGVEYVRDGRNLLSTVVVVGVPYP
EPTPYLERRVEMLKPRLGEKAWGAVYLYQAVVAVRQAMGRLFRSPKDRGVLIFLDRRYAE
PELWGALADVLQGSLVVNSVEEVLGEVERFLGGG
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
gtggagccctttccctacggcgagtttagaccacggcaacgggagatcttcgagagggtt
tacgaaacgcttaccgctgggggggtactgctgatcaacgcccccaccggcctcggcaaa
accgcggccgtcttaagcgccgccgtgaagtacatagccgagggcggcggcgccgtccac
tacgtcgtgaggacccggtccgagctcgagccgccggtgagagagctgtcgaggataata
cagcggggcttcggcgtagactatgcagtcatcaagagcagacaagacatgtgttgctac
ccccagctcaggagactgagctacctggagttcctcgccgagtgcaacctcctgaggagc
tccgggagatgcgcctactaccccccacgcgacgtggagacccccctcaagagcgtggac
gcctacgtcagattcctctgcgcagctgggagttgcccgtatgaatacgctaaagagagg
cttgcgcgcgccagcttggtcatatcgacgtactactacgtatttgggcgggagcgcccc
gccctgtggaacaaagccgtcatagtcgacgaggcccactccctgtttgaggcggtggcg
catctacacgcagtcgagatcccggagtctgaggtgagagccgcctacagagaggccaag
aagttcggctttctggaggaggccgccaagatatatggcgttttgaccttcatcaggagg
acgtccggcgtcatcgaagtcggcgacgtcctcggcttggtgggagatctcgagctagac
gccgctatcttggaaatatcgaggaggaaggccgagaggaggctcaacccctacaccccc
ctcctcctgctgaaggagctgagggaggcgcttaggagcggcgttagatacttcggggag
gtgaaagacggcgaggggggcaggaggctggtcctgcaaccgctggatccggctacgttg
gtgaaaaacgctctgaggggcgtaaaaagcgttgtctacctaagcgggacgctcccagtg
gagctcttcgcggaggctcttggggaggccaaataccgctacgtcgacatcccctttggg
gagtacatcccgcggcagaactacctcgcggtggtggatataggcgttacgacgagatac
ggcgagcgtggcgaggagatgtatgtggagatcgcgcggaggcttgcacacgccatcaac
atatcgccgggcggcgtgttggcggttttcccctcctacgaggtgctgaagggggtgaag
aagtacctacgcatatcgataccccactggtacgaggggggcgaggcgggcttgggagac
ctacccgacaagttcttcatcggggctgtggcaagggggagatacacagaaggcgtggag
tacgtaagagacggccgaaacctcctatctacggtcgtcgtggtgggggtcccctatccc
gagccaacgccgtatctagagaggcgggtggaaatgctgaagcctaggctgggagaaaag
gcgtggggcgccgtctatctataccaggcggtggtggccgtaaggcaagccatgggcagg
ctattcagaagcccaaaagaccggggggtgttgatattcctagataggaggtatgcagag
ccggagctctggggcgccctcgcagatgtgttgcagggctcccttgtggtaaacagcgtc
gaggaagtcctcggcgaggtggagcgctttctagggggcggctag
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