Pyrobaculum neutrophilum: Tneu_1780
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Entry
Tneu_1780 CDS
T00682
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
tne
Pyrobaculum neutrophilum
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tne03016
]
Tneu_1780
Enzymes [BR:
tne01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Tneu_1780
Transfer RNA biogenesis [BR:
tne03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Tneu_1780
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
SPL
Motif
Other DBs
NCBI-ProteinID:
ACB40698
UniProt:
B1YAZ8
LinkDB
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Position
complement(1562790..1564037)
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AA seq
415 aa
AA seq
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MGKIYVETYGCWLAKADAEVVRQRLGLERADSPEEADLVLVYTCAVREDGEVRQLARIRE
LAGLGRRMVVAGCLARLRPYTVKSAAPGAELLYPSQVEGGREREMRRLPRYEGGVVYVAP
LQVGCLGNCTFCATKYTRGGAGYVRSASPDDVVAHVREAVARGAREVYLTGQDVITYGFD
AGWRGGWNLPDLLERILREVEGDYRVRIGMSEPWVFAKFADQLLDVVKRDGRVYRYFHLP
VQSGSDRVLRAMGRRYTVGEYRELVRKIRRELGDAFIATDIIVGFPGEAEEEFVESVKLV
EELKFDKVHVARFSPRPFTEAAVMPRQVPDAEKKRRSKILSEVAARVALLRNGERVGRRE
VVLVDEVDHGLVVGRASDYRQVVVKRGAGDELMGRFVDVRIAGAGPVYLYGEILE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaagatctacgtcgagacctacggctgctggctggccaaggcggacgcggaggtg
gttaggcagaggctgggccttgagagggcggacagccccgaggaggcggacttggtactg
gtctacacctgcgcagttagggaagacggcgaggtgaggcagctcgcgaggatcagggag
ttggctgggctggggaggaggatggtggtcgccggctgcctggcgaggcttaggccctac
accgttaagtcggccgcgcctggggcagagctgctgtacccctcccaggtggaggggggc
cgggagagggagatgaggaggttgccgaggtacgagggcggggttgtctacgtggcgcct
ctgcaggtgggttgcctcgggaactgcaccttctgcgccacgaagtacacgaggggtggc
gccggctatgtaagaagcgcgtctcccgacgacgtggtggcgcacgtcagagaggccgtg
gccaggggggcgcgggaggtgtatctaaccggccaagacgtcataacgtacggcttcgac
gcggggtggaggggcggctggaacctgcccgacctcctggagaggattttgagggaggtc
gagggggactacagggtgaggatcgggatgtctgagccctgggtcttcgcgaagttcgca
gaccagctcctcgacgtggtgaagagagacgggagggtctaccgctacttccacctcccc
gtccagtcgggaagcgatagagtgctcagggcaatggggaggaggtacaccgttggcgaa
tatagggagttggtccgtaagataaggagggagctgggagacgccttcatcgcgacggac
ataatagtggggttccccggggaggctgaggaggagttcgtggagagcgttaagctcgtg
gaggagctgaagttcgacaaggtgcacgtggcgaggttcagccccaggcctttcaccgag
gccgccgtcatgcctaggcaggttccagacgccgagaagaagaggaggagcaaaatcctt
tctgaggtggcggctagggtagccctccttagaaacggggagcgtgtggggaggcgggag
gtggttctcgtggacgaggtggaccacggcctggtggtggggcgggcaagcgactatagg
caggtggtggtgaagaggggcgccggcgatgagctgatgggccggtttgtagacgtgaga
atcgccggggctggccccgtctacctctacggcgagattctagagtag
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