Pyrobaculum neutrophilum: Tneu_1819
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Entry
Tneu_1819 CDS
T00682
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tne
Pyrobaculum neutrophilum
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tne03400
]
Tneu_1819
DNA repair and recombination proteins [BR:
tne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tneu_1819
Archaeal homologous recombinant proteins
Tneu_1819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_13
AAA_15
ABC_tran
AAA_29
AAA_27
ATPase_2
Rad50_zn_hook
AAA_30
AAA_16
AAA
Fib_alpha
DNA_ligase_ZBD
GAS
SbcC_Walker_B
TPR_MLP1_2
CENP-F_leu_zip
MukB
APG6_N
nSTAND3
Snapin_Pallidin
V_ATPase_I
FapA
Motif
Other DBs
NCBI-ProteinID:
ACB40736
UniProt:
B1YB36
LinkDB
All DBs
Position
complement(1597193..1599301)
Genome browser
AA seq
702 aa
AA seq
DB search
MIRRIELYNFKAHAKAVFKLGEGVNFIYGPNGSGKTSLMEAVAVALFGSQWVRRTGGRWA
DYLRRGAAAGEVKLHLSHMGREVVVVRRFGEGGSSHSGTYLSIDGSTVARGDADVTAAVA
TKLGIGVEEFRHLLYIRQGELRLILEEPEYIDRVLRLDEFDKVDELVREAYNELKAKRER
VGGRAEELERRAPQLRSRIEALSRRLSEAEEALARLEADEARFVEAERRYLALRERYISL
SKERESLEKALEDGARAALELERDLEQLERELEEVRKAEEELKSLPEVGDVEGEYHQLRQ
LLATAERVPPEVRSYDPRALEEARRRYEEAARKHAEVRSRLELLRDVLRVAKMSEGGRCP
VCGAPLTREAVQRHELEALGLEKEEERLSRQIEQLQAEIKRLEALDRTYRTYAQYLSVDV
QAARRRLAELEALYQRKREVERRRAYLSALVSRRGEAERRLAELRARKAEAERKIAEANG
RLAAVEAELKTLEAEVKKAEEEYAVLRARHEEYLRAKSLALELRRQLEEARGELAAVEAE
LAKARTEAEKLERGLGAARNIRSVLGELKPLARQILTKAINEELNAVFLKLRHKESFKSA
HLAEVDGRYVLKVSTPSGPIDHRLLSLGEQNLLALSLRVALARALLGGAPFMMFDEPTEH
LDEEHRRKIVELVRDLTSVVPTVVVTSHLGEFEEVADVVIQL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgattaggaggatagagctgtacaacttcaaggcccacgcgaaggccgtcttcaagctg
ggggagggggtgaacttcatatacggccccaacgggtctggaaaaacctccctcatggag
gccgtggccgtggccttgttcggctcccagtgggtgaggaggacggggggcaggtgggcc
gactacctcaggaggggggcggccgccggggaggtcaagctacacctaagccacatgggg
cgggaggtggtggtcgttaggcggttcggcgagggggggagctcccactcgggcacctat
ctctccatcgacgggtcgacggtcgccaggggggacgcggacgtcacggctgctgtggcc
actaagctgggcatcggcgttgaggagtttagacaccttctatacattaggcagggggag
ctgaggctcatattggaggagcccgagtatatagatagggttctccgcctagatgagttc
gacaaagtggacgagctggtgcgggaggcctacaacgaactcaaggcgaagagggagagg
gtgggggggagggcggaggagctcgagagaagggccccccagctgaggtcgcggatagag
gcgctctctaggaggctttccgaggcggaggaggcgttggctaggcttgaggccgacgag
gcgaggttcgtggaggcggagaggaggtacctcgcccttagggagcgctacatatcgctt
agcaaggagagggagtcccttgagaaggctctggaggacggggcgcgcgccgcccttgag
ctggagagggatctggagcagctggagcgggagctggaggaggtgaggaaggcggaggag
gagcttaagtcactccccgaggtgggcgatgtggagggggagtaccaccagcttcggcag
cttctggccaccgccgagagggtcccgcctgaggtgaggagctacgacccgagggctctg
gaggaggcgaggaggcgctacgaggaggcggctaggaagcacgcggaggtgaggtccagg
cttgagctactgagggacgtgttgagggttgccaagatgtcggagggcgggaggtgcccc
gtctgcggggctcctctgacgcgggaggccgttcagaggcacgagctggaggcgctgggg
ctggagaaggaggaggagcggctctctaggcagatcgagcagcttcaagccgagatcaag
aggctggaggcgctggacagaacatacaggacatacgcccagtacctctccgtggatgtc
caagcggcaaggaggaggctggcggagctggaagcgctctaccagaggaagagggaggtg
gagaggaggagggcctacctctcagcgcttgtgtccaggaggggggaggcggagaggcgg
ctggccgagcttagggctaggaaggccgaggccgagaggaagatagcggaggccaacggg
aggctggcggctgtggaggcggagcttaagacactagaggcggaggtcaagaaggctgag
gaggagtacgcggtgcttagggctagacacgaggagtacctaagggctaagtcgctggcg
ttggagctcaggcgtcagctggaggaggcccggggggagctggcggctgtggaggcggag
ctggcgaaggcccgcaccgaggcggagaagctggagcgtgggctcggcgcggctagaaac
atcaggtccgtgttgggggagctgaagcccctcgccaggcagatactgacgaaggccata
aacgaggagctcaacgccgtgtttctaaagctgaggcacaaggagtcctttaaatccgcc
cacctggcagaggtagacgggaggtacgtcctcaaggtgagcaccccctccggcccaata
gaccacaggctcctctcgctgggtgagcagaacctcctcgccctctccctacgcgtggcg
ctcgccagagctctcctcggcggtgcccccttcatgatgtttgacgagccgactgagcac
ctcgacgaggaacacaggaggaagatcgtggagctggtgagagacctcacctccgtcgtg
ccgactgtagtcgtcacatcgcacctgggagagttcgaggaggtggccgacgtggtgata
cagctgtag
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