Pyrobaculum neutrophilum: Tneu_1865
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Entry
Tneu_1865 CDS
T00682
Name
(GenBank) phosphoesterase DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tne
Pyrobaculum neutrophilum
Pathway
tne03410
Base excision repair
tne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tneu_1865
03430 Mismatch repair
Tneu_1865
03440 Homologous recombination
Tneu_1865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tne03400
]
Tneu_1865
DNA repair and recombination proteins [BR:
tne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Tneu_1865
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Tneu_1865
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Tneu_1865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
ACB40780
UniProt:
B1YBH8
LinkDB
All DBs
Position
complement(1642647..1643582)
Genome browser
AA seq
311 aa
AA seq
DB search
MGRVLTVFAHGDADGVCSAAVVVAALAGEYEEVEVYFTHPVDLLKDFREFARGDVYIVDV
AIDEKAAEEAGRVFAGYGGRVVYVDHHPLSADLPRVEVVHEVGSSASELAYRLLGGRLPK
SYSRVALYGAISDYMDHTPWVREALEAWDRRIIYFEAGVLMQGLERARKDHDFKREVVRH
LAKNLPPSAMARLMKMAEEQARVNEELVWWVERNVSLRGSVALVVNPPGPLGLAANLARG
LAGAEVGVAAEARGDMYVVSLRSRGLDLNAFLRDFARRYGVSGGGHPNAAGARIPRDLLP
VLVEELSRLRR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtgtcttaacggtttttgcgcatggcgacgcagacggcgtttgttcggctgct
gtcgtagtggcggcgctggcgggggagtacgaggaggttgaggtctatttcacgcatccg
gtggacctgctgaaggactttagggagttcgcccggggcgacgtctacatagtggacgtg
gcgatagacgagaaggcggcggaggaggctgggcgggttttcgccgggtacggggggagg
gtggtctacgtcgaccaccaccccctctccgccgatttgccccgtgtggaggtggtgcac
gaggtgggctcctcggcctccgagctggcgtataggctcctcggcgggaggctccccaag
tcctacagcagggttgccctctacggcgccatcagcgactatatggaccacacgccgtgg
gtgagggaggcgttggaggcttgggaccgccggattatatacttcgaggcgggggtcctg
atgcagggcttggagagggctaggaaggaccacgacttcaagagggaggtggttaggcat
ctggcgaagaacctcccgccctctgcgatggctaggcttatgaagatggctgaggagcag
gcgagggtcaacgaggagctcgtctggtgggtggagaggaacgtctcgctccgcggctca
gtcgcgttggtggtcaacccgccggggccgctcggcttagccgccaacttggccaggggg
ctggcgggggctgaggtgggggtggcggctgaggctagaggcgacatgtacgtagtgagc
ctccgttccagggggcttgacctaaacgcctttctgagggatttcgccaggagatacggc
gtttcgggcgggggccatccaaacgcggccggggcgaggatcccaagagacctcctcccc
gtcctcgtggaggagctcagccgcctacgtagatga
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