Pyrobaculum neutrophilum: Tneu_1964
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Entry
Tneu_1964 CDS
T00682
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
tne
Pyrobaculum neutrophilum
Pathway
tne03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tneu_1964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tne03021
]
Tneu_1964
Enzymes [BR:
tne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tneu_1964
Transcription machinery [BR:
tne03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Tneu_1964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Zn_ribbon_16
CpXC
Zn_ribbon_9
Ribosomal_L32e
MqsA_antitoxin
Zn_ribbon_ZPR1
Motif
Other DBs
NCBI-ProteinID:
ACB40879
UniProt:
B1YC25
LinkDB
All DBs
Position
1730691..1733345
Genome browser
AA seq
884 aa
AA seq
DB search
MSLRGELDTIPRKAIKSIKFGILSPEMIRKYSVMEVTTSEVYDEGGLPVRGGIADRRLGV
AEPGARCETCGQTHDVCPGHFGHVELVKPVIHVEYARIIYDVLRTTCPNCGRIMLKDEEI
QRYRERLTKLKSKWRLLAMNLHEKIRKKASERMTCPHCGYKRNKVRFERPYYFYEETEEG
ALVKLDPEVLRDRLAKVPNEDLELLGLNPSVARPEWAILKVLPVPPPHVRPSIQLETGIR
SEDDLTHKLVDIIRMNEKLKIAIETGAPTNVVDNLWDLLQYHVATYFDNELPGIPVAKHR
GGRPLKGIAQRLKGKEGRFRGSLSGKRVNFSARTVISPDPHISINEVGVPYDIAKILTVP
ERVTEWNVDVLREYVMRGPETWPGANYVITPEGRRIDLRYVKDKRALAERLAPGWIVERH
LVDGDIVLFNRQPSLHRVSIMGHIVKVLPGRTFRLHLAVCPPYNADFDGDEMNLHVPQTE
EARAEARTLMLVEKHIITPRYGGAIIGARQDYIIGAYLLSQKSTFLTKKELAYLLGAGKS
TEDPPEPAFLHPVELWTGKQVISHFLPKDLNWVQPTAFKSKCQDAYRCAGDEWIIIINGV
MVKGVLDKKSIGAEQVDSLWHRIARDYPPEVARRWLDSSLRLFLRYLDLRGFTFGIDSVY
LPPEAYGEIDALVEESMKKADALIEEFRSGRLEAMPGFTVEETFENKITEILSKVREDAA
VVVEKYISKNTEGYLMAKTGARGSIVNIVQMVATLGQQTIRGERIRRGYRTRTLPHFPPG
DIGPHAGGFVGRCFRCGLTPVEYFFHAAAGRDGLIDTAVRTAQSGYMQRRLINALQDVYV
AYDGTVRFSGANLLQMLYGEDGVDVSRSDHGKVADIKSLKLWIR
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgttaaggggggaacttgacactatcccgcgaaaggcgattaagtccatcaagttc
gggatcctaagcccggagatgatacgtaagtactcggtgatggaggtgacgacttccgag
gtctacgacgagggcggcttgcctgttcgcggcgggattgccgaccgcaggctcggcgtt
gccgaacccggcgccaggtgcgagacctgcggccagacccacgacgtgtgcccaggtcat
ttcgggcatgttgagctcgtgaaacccgttatccatgtggaatacgccaggatcatatac
gacgtcttgagaaccacctgtcccaactgcggccggataatgttgaaagacgaggagata
cagcgttacagggagaggttgacgaagctgaagagcaagtggaggcttttggccatgaat
ctacatgagaagatcaggaagaaggcctcggagaggatgacgtgtccccactgcggctac
aagaggaataaggtgcggtttgagagaccgtactacttctacgaggagactgaggagggg
gctctcgtgaagctggatcccgaggtcctaagggataggcttgccaaggtgcccaacgag
gacctggagctccttgggcttaacccctcggttgctcgtcccgagtgggcgattttgaag
gtccttcccgtgccgcctccgcatgtgcggccctcgatacagctggagacaggcatccgc
tccgaggacgacctaacccataaactcgtcgacatcattaggatgaacgagaagcttaag
atagctattgaaaccggcgcgccgacaaacgtggtggacaacctgtgggacctcctgcag
taccacgtggcgacctacttcgacaacgagctacccgggatcccagtggctaaacacagg
ggcgggaggccgttaaaggggattgcacagcgcttgaagggtaaggaggggaggttccgc
ggctctctctccggcaaacgtgtgaacttctcggcgcgtacagtcataagcccagacccc
cacattagtataaacgaggtgggggttccctacgacatagccaagattctgacagtaccc
gagagggtgaccgagtggaacgtagacgtgcttagggagtacgtgatgagggggcccgag
acttggccaggagccaactacgtgattaccccggagggcaggaggatcgacctgcggtac
gtcaaggacaagagggcgctggccgagaggcttgcccccggctggattgtggagagacac
ctagtagatggggatattgttctcttcaacaggcaaccgagcctccacagggtctccata
atgggccacatcgtgaaggtgctcccggggaggacttttaggctacacctcgccgtatgt
ccgccctacaacgccgatttcgacggcgacgagatgaacttgcacgtgcctcagacggag
gaggccagggctgaggcgaggactctgatgttggtggagaagcacataattaccccgcgc
tacggcggcgccataatcggcgctaggcaagactacataataggggcgtacctcctctct
cagaagtcgacgtttcttacgaagaaggagctggcttatctcctcggcgctgggaaatcc
acggaggatccgccggagccggctttcctacaccccgtggagctctggactgggaagcag
gtcatttcccacttcctgccgaaggatctaaattgggttcagccgacagcctttaagtct
aaatgccaagacgcctataggtgcgccggcgatgaatggatcataataattaacggcgtt
atggtgaagggagtgctggacaagaagtccatcggtgcagagcaggtggactccctctgg
cacaggatagcccgcgactacccgccggaggtcgctagaaggtggctcgactcctccctt
aggctcttccttaggtacctagacctacggggcttcaccttcgggatagattccgtgtat
ctacctcccgaggcctatggcgagattgacgcgctggttgaagagagcatgaagaaggcc
gacgcgttgatagaggagttcagaagcgggcggctggaggccatgcctggattcacagtg
gaggagacctttgagaacaagatcaccgaaattctctcgaaggtccgcgaagacgccgct
gttgtagttgaaaaatacattagcaagaacacagagggctacctcatggctaagacgggg
gcgagaggtagcatcgtcaacatagtccagatggtggctaccctgggccaacagaccatc
agaggagagaggatcagacgcggctataggactaggacgctgccccactttccgccgggc
gacataggtccacacgcggggggttttgtagggcggtgttttagatgtgggttgactcct
gtggagtatttcttccacgcggctgccggcagagacggtttgatagacacggcagttcgt
acggcgcagtccggctatatgcagaggaggctcatcaacgctctgcaagacgtgtacgta
gcctacgacggcaccgttagattcagcggagctaacttgctccagatgctctacggcgaa
gacggcgtcgacgtaagccgttcggatcacgggaaagtcgcagatataaagtccctaaag
ctctggataagatga
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