KEGG   Pyrobaculum neutrophilum: Tneu_1985
Entry
Tneu_1985         CDS       T00682                                 
Name
(GenBank) XPG I domain protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
tne  Pyrobaculum neutrophilum
Pathway
tne03030  DNA replication
tne03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Tneu_1985
   03410 Base excision repair
    Tneu_1985
   03450 Non-homologous end-joining
    Tneu_1985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tne03032]
    Tneu_1985
   03400 DNA repair and recombination proteins [BR:tne03400]
    Tneu_1985
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tne04147]
    Tneu_1985
DNA replication proteins [BR:tne03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Tneu_1985
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Tneu_1985
DNA repair and recombination proteins [BR:tne03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Tneu_1985
Exosome [BR:tne04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Tneu_1985
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc VBS_C3G9 HHH_5
Other DBs
NCBI-ProteinID: ACB40900
UniProt: B1YC46
LinkDB
Position
1747698..1748747
AA seq 349 aa
MGVTELGKLIGREARREIKLENLAGRCIALDAYNALYQFLASIRQPDGTPLMDRQGRVTS
HLSGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEARRRVKEKAMEEVVKAIREGKRDD
VAKYMKRVIFLTNEMVEDAKRLLTYMGVPWVQAPSEGEAQAAHMAKRGHCWAVGSQDYDS
LLFGSPRLVRNLAVSPKRRSGEEVVEVSPEVVELDSVLKALKLKGREQLIDVAILLGTDY
NPDGVPGVGPQKALKLVLEFGSLEKMLDTVLRGVSFPVDPLEIKRFFLNPPVTEEYALEL
KNVDERGLVNFLVGEHDFSEERVAKAVERLKKARARQKTSSLDSFFHGA
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgggtgttacagagttgggcaagcttataggtagagaggcgaggcgcgagataaagctc
gaaaacctagccggcagatgtatcgccctagacgcctacaacgccctataccagttcctc
gcctcgattagacaacccgacggcacacctctgatggaccgccagggcagagtcactagc
cacctctcagggctcttctaccgtaccattaacctgatggaggccggcataaagccggtt
tacgtatttgacgggaagccgcctgagttcaagctggccgagatagaggcgaggaggagg
gttaaggagaaggccatggaggaggtggtgaaggcgataagggaggggaagagagatgac
gtggcgaagtacatgaagagggttatctttctcaccaatgagatggttgaggacgccaag
aggctactgacctacatgggcgtcccctgggtgcaagcgccgagcgagggggaggctcag
gccgcccacatggcgaagagggggcactgttgggccgtcggtagccaagactacgactcg
cttctattcggctcgcctaggttggtgaggaatctcgccgtgtcgcctaagaggaggagc
ggggaggaggtggtggaggtgtccccggaggtggtggagctagactccgtgttgaaagcg
cttaagctgaagggcagggaacagcttatagacgttgccatactgctgggaaccgactac
aaccccgacggggtcccgggggtcgggcctcagaaggcgctcaagttggttttggagttc
ggctctcttgagaagatgctagacacggttctcaggggggtctccttccctgtggatccc
ctcgagataaagaggtttttcctcaatccgcctgtcacagaggagtacgccctggagttg
aagaacgtagacgagcgaggccttgtgaatttcctcgtcggcgaacacgacttcagcgag
gagagagtcgccaaggctgtggagaggcttaaaaaggcgcgggctaggcagaaaacctcg
tctctagacagctttttccatggcgcatag

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