KEGG   Pyrobaculum neutrophilum: Tneu_2008
Entry
Tneu_2008         CDS       T00682                                 
Name
(GenBank) Replication factor C
  KO
K04801  replication factor C small subunit
Organism
tne  Pyrobaculum neutrophilum
Pathway
tne03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Tneu_2008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tne03032]
    Tneu_2008
DNA replication proteins [BR:tne03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     Tneu_2008
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RuvB_N RCF1-5-like_lid AAA_14 AAA_16 AAA_22 AAA_assoc_2 Rad17 AAA_3 AAA_18 AAA_24 AAA_25 Mg_chelatase AAA_5 DNAX_ATPase_lid ResIII DEAD AAA_28 PhoH nSTAND3 AAA_2 AAA_30 AAA_11 AAA_33 AAA_19 RNA_helicase ATPase_2 SLFN-g3_helicase Cdc6_lid TIP49_C AAA_7 TIP49 NPHP3_N Gp44_lid bpMoxR Viral_helicase1 ABC_tran IstB_IS21 Parvo_NS1 AAA_17 UBA_Rad5 TsaE KTI12
Other DBs
NCBI-ProteinID: ACB40922
UniProt: B1YC68
LinkDB
Position
1767259..1768245
AA seq 328 aa
MAELFWFEKYRPRSFDEVVDLEEVKSRLREFVRSGNMPHLLFYGPPGTGKTTMALVLARE
LYGEYWRENTLELNASDERGINVIRERVKEFARTAPIKAPFKLVILDEADNMTSDAQQAL
RRIMEIYAQNTRFILLANYVSRIIDPIISRCAVFRFSPMPRSLMAERLKYIAKREGIEVG
EDALDLIYELSEGDMRKAINLLQVAAATNKVVDANAVAAAAAAVKPSDILELFNLALGGD
YLKAREKLRELMYIKGVAGVDFIRAFQRELIRMPLDDDLKAEIAELLADVDYRLTQGADE
EIQMAYLLAKLGSIGKRAKPGAAPTKKR
NT seq 987 nt   +upstreamnt  +downstreamnt
atggcggagctgttttggtttgagaagtatcgtcctcgttcgtttgatgaggtggtggat
ttggaggaggttaagagtcggcttagggagtttgtgaggagtggtaatatgccgcatctc
ttgttttacggccctcctgggactgggaagaccaccatggctcttgtcttggcgagggag
ctctacggcgagtactggcgtgagaatacgctggagctcaacgcctcagacgagagaggt
ataaacgtgatacgggagagggtgaaggagttcgcccgcacagccccaatcaaagccccc
ttcaaactagtcatactagacgaggcagacaacatgacaagcgacgcccaacaagccctc
agaagaataatggaaatatacgcacaaaacacaagattcatactactggcaaactacgtt
tcacgtatcatagaccccataatctctagatgcgccgtgttccgcttctctcccatgcca
cggagtttgatggcggagaggttgaaatacatcgccaagagggagggtatagaggttgga
gaagacgctctggacttaatctacgagctttccgagggcgatatgcggaaggcgataaac
ctgctccaggtcgccgcggcgacgaacaaggtcgtagacgcaaacgctgttgcagccgcc
gctgccgcggttaagccctccgacatcctcgagctgtttaacctagcgcttgggggcgac
tatctgaaggccagagaaaagctaagggagcttatgtacataaagggcgtggcgggcgtg
gacttcataagggctttccagagagagcttatccgtatgcccctcgacgacgatctaaag
gccgagatagcggagttgcttgccgatgttgactacaggctgactcagggggctgacgag
gagatccagatggcgtatctacttgcaaaactcggctccataggcaagagagccaagcct
ggggctgccccgaccaagaagaggtga

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