KEGG   Pyrobaculum neutrophilum: Tneu_2009
Entry
Tneu_2009         CDS       T00682                                 
Name
(GenBank) AAA ATPase central domain protein
  KO
K04800  replication factor C large subunit
Organism
tne  Pyrobaculum neutrophilum
Pathway
tne03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Tneu_2009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tne03032]
    Tneu_2009
DNA replication proteins [BR:tne03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     Tneu_2009
SSDB
Motif
Pfam: AAA RCF1-5-like_lid AAA_22 Rad17 RuvB_N AAA_16 RNA_helicase AAA_14 AAA_33 nSTAND3 AAA_5 Zeta_toxin DNAX_ATPase_lid AAA_28 AAA_assoc_2 NACHT TIP49 NTPase_1 TsaE AAA_19 ABC_tran AAA_17 DUF815 AAA_7 IstB_IS21 AAA_25 AAA_18 AAA_11 AAA_3 RsgA_GTPase Gp44_lid ORC-CDC6-like AAA_24 bpMoxR AAA_30 Mg_chelatase AAA_29 Sigma54_activat AAA_2 ResIII
Other DBs
NCBI-ProteinID: ACB40923
UniProt: B1YC69
LinkDB
Position
1768245..1769513
AA seq 422 aa
MGIPWVEKYRPKAFSEIVNQEEAKTLLASWICARFRAPKEFCARWAKKREKEVAEAKAVL
LAGPPGIGKTTVVHALAREIRYELIELNASDIRTGERIKLVVGRGLKESSLFGYEGKLVL
FDEVDGLHVKEDEGGLEAIVEIVETAKVPIVMTANNPYDPKFRPLRDISLVVNLKRLSEE
EVVEVLRRICTAEGAKCEEEALRSIAKSSLGDLRAAINDLQMYLSGGRKTLTVDDIKRVG
ERNPQLSMFEVLDRVYRARWFDEARAVSFNPSFDWEQYFLWALETVPVVYKDVETAAAAY
DRLSKADMFLGRIKRMQEWELLPYALELALGGVSQVKNKPRLPPFIKYGFPQRLLLLAKS
REARRRREALVEYLAQNLHISRSLARSDIIYVLSALARRDPKVVERLSRALGINAIDVKN
LL
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggggatcccgtgggttgaaaaataccggccaaaggccttttcggaaatcgtaaaccag
gaggaggccaagactctccttgcgtcttggatctgcgcgaggtttagagctccgaaggag
ttctgcgcccgctgggctaagaaacgagaaaaggaggtcgctgaggcaaaggccgtattg
ctggctgggccgccggggattggcaaaaccaccgttgtccacgcacttgctagagagatt
aggtatgagctcattgagcttaacgcaagcgatataaggacaggggagaggataaagctg
gtcgtggggagggggcttaaggagagttctctcttcggatacgagggcaagcttgtgcta
tttgacgaggtagacggcctccatgtgaaggaggacgagggggggcttgaggccatcgtc
gagattgtggagaccgctaaggtgcctatagttatgaccgcgaacaacccatatgaccca
aagtttaggcctctcagggatatatccctcgtggttaatctaaagagactttcggaggag
gaggtcgtcgaagttcttaggaggatatgtacagcggagggggctaagtgcgaggaggag
gcgcttagaagcatcgccaagtcctccctcggcgatttgagagccgccatcaacgacctc
cagatgtatctgtcgggcggtagaaaaacgcttaccgtagacgatatcaagagagttggc
gagaggaacccgcagctatccatgtttgaagttctggatagggtatatagggctaggtgg
tttgacgaggcgcgcgccgtctccttcaacccctcctttgactgggagcagtacttcctg
tgggctcttgaaacagtgccggtggtgtataaggacgtggaaacggcggcggccgcctac
gatcgccttagtaaagcggatatgttcctcgggaggatcaagaggatgcaggagtgggag
cttctgccgtatgcgctagagctggccctcggcggcgtgtcgcaggtgaagaacaagccg
aggctacccccgtttatcaagtacgggttcccgcagaggcttctgcttcttgctaaatct
agggaggccagaaggcgccgcgaggccctcgtggagtatctagcacagaacctgcacatc
tcccggtctctcgccagatcagacatcatatacgtgctttctgcgctggcgaggcgggac
ccgaaggttgtggagaggttgagcagggcgttgggcataaacgctatcgacgtgaaaaat
ctgctctga

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