Tetraodon nigroviridis (spotted green pufferfish): GSTEN00000919G001
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Entry
GSTEN00000919G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTEN00000919G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00000919G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GSTEN00000919G001
mRNA degradation factors
5'-3' decay
Lsm complex
GSTEN00000919G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TbpB_C
Motif
Other DBs
NCBI-ProteinID:
CAF87885
UniProt:
Q4TGU7
LinkDB
All DBs
Position
undetermined
AA seq
139 aa
AA seq
DB search
NLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEIVSGRAAARAHTHTHTHTHTHTH
THTHTDHQLSCEPCFSNLSNSLQDLDKPCDAFLQQVSIEEILEEQRMEQQAKQETEKVKV
QALKDRGLSLPRADHLDEY
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
aacctggtcttccatcagacggtggagcggatccacgtggggaagaagttcggagacatc
ccccgaggaatcttcatcgtcaggggggagaatgtggttctgctgggggagatcgtgagt
gggcgagcagctgcgcgcgcacacacacacacacacacacacacacacacacacacacac
acacacacacacacagatcaccagctcagctgtgagccttgcttctccaacctgtccaac
tctctgcaggacctggacaaaccgtgcgacgccttcctgcagcaggtgtccatcgaggag
atcctggaggagcagcggatggagcagcaggccaagcaggagacggagaaggtgaaggtg
caggccctgaaggaccggggcctgtccctgcccagggccgaccacctggacgagtactag
DBGET
integrated database retrieval system
