Tetraodon nigroviridis (spotted green pufferfish): GSTEN00002297G001
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Entry
GSTEN00002297G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTEN00002297G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00002297G001
03009 Ribosome biogenesis [BR:
tng03009
]
GSTEN00002297G001
Enzymes [BR:
tng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSTEN00002297G001
Spliceosome [BR:
tng03041
]
Complex A
U1 snRNP components
U1 related factors
GSTEN00002297G001
Complex B
GSTEN00002297G001
Ribosome biogenesis [BR:
tng03009
]
Eukaryotic type
Pre-60S particles
Helicases
GSTEN00002297G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Motif
Other DBs
NCBI-ProteinID:
CAF88737
UniProt:
Q4TEE5
LinkDB
All DBs
Position
undetermined
AA seq
307 aa
AA seq
DB search
DRDRGRDRGSPRFGSSRGGPTSGRKFGNPGERLRKKRWDLDELPKFEKNFYTEHLEVERT
SQFEVEEYRRKKEITIRGTGCPKPIIKFHQAHFPQYVMDVLMQQNFKEPTPIQAQGFPLA
LSGRDMVGIAQTGSGKTLSVSPAAPFPYRPSRRRSSLHQSFGLLFPLTSVSPACYCAHQP
SALLGAWRWTHMFGFGPHEGIGPAGSAGSIRLRKVLTHQKHLRVRRCAEGTSNPGSGERC
GDLHRHARASHRLPGGREDQLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMW
SATWPKE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gatcgagaccgtggccgcgacagagggagtccgcggtttgggtccagcagaggaggacca
acgtcggggcggaagttcgggaaccccggggaacgtttacgcaagaagagatgggacctg
gacgagctgccgaagttcgagaagaacttttacaccgagcatctggaagtagagaggacg
agccagtttgaagttgaggagtatcgcaggaaaaaggaaatcaccattcgaggcacaggc
tgcccgaaacccatcatcaaattccaccaggcgcattttccccagtacgtgatggatgtg
ctgatgcagcagaacttcaaggagcccacccccatccaggcccaagggttccctctggcc
ctcagtggaagagacatggtgggcattgctcagactggctcggggaagaccttatcggtg
agtcccgccgctccttttccttatcgcccaagccgacgccgtagcagcctccatcagtcc
tttggcctcctctttcccctcacttcagtatctcctgcctgctattgtgcacatcaacca
tcagccctacttggagcgtggagatggacccatatgtttggttttggcccccacgaggga
attggcccagcaggttcagcaggtagcatacgactacggaaagtcctcacgcatcaaaag
cacctgcgtgtacggcggtgcgccgaagggacctcaaatccgggatctggagagaggtgt
ggagatctgcatcgccacgcccgggcgtctcatcgacttcctggaggccgggaagaccaa
ctgcggcgctgcacatacctggttctggacgaggcagaccgcatgctggacatgggcttc
gaacctcagattcggaagattgtggaccaaatcaggccggacagacagacgctgatgtgg
agcgccacctggcccaaagag
DBGET
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