Tetraodon nigroviridis (spotted green pufferfish): GSTEN00003736G001
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Entry
GSTEN00003736G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06587
integrin alpha 11
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
tng04810
Regulation of actin cytoskeleton
tng04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00003736G001
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00003736G001
09142 Cell motility
04820 Cytoskeleton in muscle cells
GSTEN00003736G001
04810 Regulation of actin cytoskeleton
GSTEN00003736G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00003736G001
Cell adhesion molecules [BR:
tng04515
]
Integrins
Integrin alpha subunits
GSTEN00003736G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
VWA_2
FG-GAP_3
FG-GAP_2
Motif
Other DBs
NCBI-ProteinID:
CAF89740
UniProt:
Q4TBJ2
LinkDB
All DBs
Position
13
AA seq
1349 aa
AA seq
DB search
FNFHTKKVWIFPGSEEARFGSTVQQHQAGGRQWLLVGAPFQTSGRKRTGDVFRCPLDNGT
SEGCSRLHLGNLSLDSVSQRAEEMRLGLTLTSDPRDSSFVVACGPLWSHECGSSLYSTGI
CSRVSRTFRPTGTIAPALQRCETFMDIIIVLDGSNSIYPWSEVQNFLINILHKFFMGPGQ
TQVGVVQYGSSVVQEFRLGEHRTVEEVVVAARSIRQRGGEETRTALGMEVARSQGFGRGG
RPGARKVMIVITDGESHDSAQLPQAVARSNRDNITTYAIAVSAPRPSTPPRRRPANTLHL
QVLGSYNRRGMDPEAFLEEIRLIASDPDQEHCFKVTDESALKDIVDALGERIFSLEGQRG
EEDGGDEGEGDEGDDDDDDDDDDDDDDVCRCQPSGSRLRPADGSGRLLRTSSQIRSERSG
GKLAANAEQMVFLPHGFRFRAGPAPGSGSKVENRDRPKDGVLLGAVGANDWNGAVLKDTK
DGKVVPPRSSYEDEFPEELKNHGAYLGTRLRLHLPLVLRTFWKDPVPLVFPGYSVGSLIS
SDGSQLYTAGAPRFNHTGKVIVFTLADSGNLTVLKALLGEQIGSYFGSQLLSMDVDGDGR
SDVLLVAAPMYYSQGWERGKVYVYGVTPELALVLQGALEASDGAQNARLGSSMAAIGDMN
GDGFQELVVGAPLEDDHQGAVYVFYGRGRTIQRRHRQVTGGASGEERPQKSFFPLFSSAA
AAGCRLLRRSEILRSKCPRRPGCQRRRAGGPGSGGAGGRRHHLVSRCGPGPGRPALPAGE
GGRLQQGLSARREGRRLHGRHRLPKPELQDQRHRNDVWYSLAFDEGRSPPRAVLEEPDQQ
QLSRLFLQTGSQSCRHHAFSVQETSDYGHPITVVLETGLQDPDRGPVLDPDQPSVLRAAL
PFWNGCDQEDACVPDLVLHAGTDLLDVGDTGGAGCRLTGVPSVSATGNSAAPEASGRCAA
TGARQRAALAWWRLGAGRWRCWPGWRTGARTPTQPHFASPPPPTCSSPAWFSRWGIILEN
APAPPPRPQAPPIFLQDQSDVEMECFSESRAAGELSCNVSAPFLKPSAQVSFRLEFELRP
ALLLDHIQVVMATSSEGRDRNPEDNICYIFLPLRYQADLLFTRDPNPLRFQIQAGGPAPF
SWSQGGADSCHDFNLTYQIRNLGTLPVHGLVFRAEIWAVTRGGNQLVEMLDLGLDQEEEE
GRPSGASSFLPPRGSGSRCQHPPPPAANGPAAEDLSHLSQLNRSNGASVAAQCGLHLPAS
TQLEVRLRGRLLCPALLAVGFRALEVMTTASIRMDASSPAFLQEDLAVREIILEIRKEGD
YINPVWIILGSSLGGLLLLALLVLALWKV
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
ttcaacttccacaccaagaaggtctggatcttccccggttctgaggaggcccgcttcggt
tccacggttcagcagcaccaggccggcggccgccagtggctgctggtgggcgcccccttc
caaaccagcggcaggaaacggacgggcgatgtgttcaggtgtcctctggacaacgggacc
tccgaaggctgcagccgcctgcacctggggaacctttctctggacagcgtgtcccagagg
gccgaggagatgaggctgggtctgaccctgacctctgaccccagagacagcagcttcgtg
gtggcctgtggtcctctctggtctcatgagtgtggcagctccctctacagcactgggatc
tgttccagggtcagccggaccttcaggcccaccggcaccatcgccccggccctgcagagg
tgtgagaccttcatggacatcatcatcgtcctggacgggtccaactccatctacccctgg
tccgaggtccagaacttcctcatcaacatcctgcacaagttcttcatgggtccaggtcag
acgcaggtgggggtggtccagtacggctcctcggtggtccaggagttccgcctgggtgag
caccggacggtagaggaggtggtggtggcggccaggagcatcaggcagcgcggcggcgag
gagacgcggacggcgctggggatggaggtggcgcggtcgcaggggttcgggcgcggcggc
cgacccggagcccggaaggtgatgatcgtgatcacggatggggagtcgcacgacagcgcg
cagctgccgcaggccgtcgcccgtagcaacagggacaacatcaccacctacgccatcgct
gtgagcgccccccgcccgtccacgccgccccgccggcggccagctaacaccctccatttg
caggtgctgggttcctacaaccggcgcgggatggaccccgaggccttcctggaggagatc
cggctgatcgccagcgaccccgaccaggagcactgcttcaaggtgacggacgagtcggcg
ctgaaggacatcgtggatgcgctgggggagaggatcttctccctggaaggtcagagaggg
gaggaggacggcggggatgagggagagggtgatgagggtgatgatgatgatgatgatgat
gatgatgatgatgatgatgatgtgtgcaggtgccagccctcggggtcgaggcttcggcct
gcagatggctcaggccggcttctccgcacatctagtcaaatccgaagcgagaggagcggc
ggaaagttggcggctaacgcggagcagatggtttttctgccacatggattcaggttcaga
gccggtcctgctccaggttctgggtctaaagtggagaaccgggaccggcccaaagacggc
gttctcctcggggccgtgggggccaacgactggaacggcgccgtgctgaaggacaccaaa
gatggaaaagtggtgccgcccagatcttcctacgaggacgagtttccggaggagctgaag
aaccacggagcctacctgggtacgaggctccgcctccacctgcctttggtcctcagaact
ttctggaaagatccggtgccgctggtgtttccaggttattccgtgggttcgctcatctcg
tccgacggctcccagctgtacacggccggagcgccgaggttcaaccacaccgggaaggtc
atcgtcttcaccctggcggactcggggaacctgacggtcctgaaggctctgctgggagag
cagatcggttcctactttggcagtcagctcttgtccatggacgtggacggtgacggacgg
agcgatgttctcctggtggcagcgccgatgtactacagccagggctgggagagagggaag
gtctacgtctacggcgtgacgccagagctggcgttggtcctccagggggcgctggaggcg
agcgatggcgcccagaacgcccggctgggctcctccatggccgcgatcggggacatgaac
ggggacggcttccaggagctggtggtgggggcgcctctggaggacgaccaccagggggcg
gtctacgtcttttatgggcggggcagaaccatccagcggcgccaccgacaggtaacaggt
ggagcttctggggaggaaagaccccagaagtcatttttcccactgttttcctcggcagcg
gctgccggctgccggcttctccgccggtctgagatacttcggtcaaagtgtccacggcgt
cctggatgtcaacggagacgggctggtggacctggcagtgggggcgctgggggccgccgc
catcatctggtctcgcggtgtggtccgggtccaggccggcctgctcttccagccggagaa
ggtggacgtctccaacaaggactgtcggcgcggcgggaaggccgccgcctgcatggccgt
caccgtctgcctaagcctgagctccaggaccagcgccaccgcaacgacgtctggtacagc
ctggcctttgatgaaggccgctctcctcctcgagccgtcctggaggaaccggaccaacag
cagctcagtcgtctgttcctgcagacaggaagtcagagctgcaggcaccacgccttctct
gttcaggagaccagcgactacggccatcccatcacggttgtcctggagacggggctgcag
gacccggaccggggtcccgtgttggacccggaccagccgagtgtcctgagggctgcgctg
cccttctggaacggctgcgaccaggaggacgcctgcgtccccgacctcgtcctccacgcc
ggcaccgacctgctggacgtcggcgacaccggcggcgccggttgtcggctcaccggggtg
ccgtctgtgtccgccacaggcaattctgcagctccggaagcgtctggtcggtgtgcggcc
accggagcgcggcagagggcggcgctggcgtggtggaggctcggcgcaggaaggtggcgg
tgctggcccggctggagaaccggggcgagaacgcctacgcagccgcacttcgcgtctcca
cctcctccaacctgctcttctccggcctggttctcaaggtggggaataatcctggaaaac
gctccggctccgcctccacgcccacaggcccctcccattttcctgcaggaccaatcggat
gtggagatggagtgtttctcagagagcagagcggccggtgagctgagctgcaacgtcagc
gcgccgtttttgaagccatcggcccaggtgtctttccgtctggagtttgagctccgccct
gcgctgctcctggaccacatccaggtcgtcatggcgaccagcagtgagggccgggacagg
aaccctgaggacaacatctgctacatcttcctccctctcaggtaccaggctgacctcctc
ttcaccagggaccccaaccctcttcgttttcagatccaagcaggaggccccgcccccttt
tcctggtctcagggtggagccgacagctgtcacgacttcaacctgacgtatcagatccgg
aacctgggaaccttgccggtccatggcctcgtcttcagggccgagatctgggcggtgacc
aggggagggaaccagctcgtggagatgctggacctgggtctggaccaggaggaggaggag
ggaagaccttcaggggctagcagcttcctgccccctcggggctccgggtcccgctgccag
cacccaccgccgccagcagccaatgggccagcagcagaggacctgtcccacctgtcccag
ctgaaccgcagcaacggcgccagcgtggcggcgcagtgtggcctccacctgccggcctcc
acacagctggaggtgaggctcagaggacggctgctgtgtcccgctctgctggccgtgggc
ttccgcgctctggaggtgatgaccacggcgtccatccggatggacgcctccagtcccgcc
ttcctccaggaggacctcgctgtccgggagataatcctggagatcaggaaagagggggat
tacatcaacccagtctggattatactaggaagctcactgggaggcctcctgctactggct
ttactggtgctggccctctggaaggta
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