KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00003842G001
Entry
GSTEN00003842G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSTEN00003842G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tng03041]
    GSTEN00003842G001
Spliceosome [BR:tng03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    GSTEN00003842G001
 Complex B
    GSTEN00003842G001
 Complex C
   U2 SnRNP specific factors
    GSTEN00003842G001
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_5 DUF4523 xRRM
Other DBs
NCBI-ProteinID: CAF89828
UniProt: Q4TBA4
LinkDB
Position
undetermined
AA seq 218 aa
MDIRPNHTIYINNINDKVKKEELKRSLYALLSQFGQIVDIVAMKTMKMRGQAFVIFKELT
AATNALRQLQGFPFYNKPMRIQYAKTDSEVIAKMKGTYGDKEKKKKEKKKAQELPANQMK
KAAVVPAVPLHSPAAQVPDNPPNYILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPGKH
DIAFVEFESDLQAGVAKDALQGFRITATCAMKITFAKK
NT seq 654 nt   +upstreamnt  +downstreamnt
atggatattcgaccaaaccacacaatctacatcaacaacatcaatgacaaagtcaagaaa
gaagagctgaagcgatccctctacgctctgctctcccagtttggtcagattgttgacatt
gtggccatgaagaccatgaagatgaggggacaggcctttgtcattttcaaagagctcacg
gccgccaccaacgccctgaggcagctgcagggtttccccttctacaacaagcccatgagg
atacagtacgccaagaccgactccgaggtcatcgccaagatgaagggcacttatggagac
aaggagaagaagaagaaggaaaagaagaaggctcaggagcttccagccaaccaaatgaag
aaggccgcagtggtaccggcagtccctcttcactcacctgcagcacaggttcccgacaac
ccgcccaactacatcttgttcctgaccaacctgccagaggagaccaacgagatgatgctg
tccatgttgttcaaccagtttcctggttttaaagaggtgcgtctggtccctgggaaacac
gacatcgcctttgtggagtttgagtcggacctgcaggcgggcgtggccaaagatgcgctg
cagggcttcagaatcacggccacctgcgccatgaagatcaccttcgccaagaag

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