Tetraodon nigroviridis (spotted green pufferfish): GSTEN00003936G001
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Entry
GSTEN00003936G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tng01002
]
GSTEN00003936G001
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00003936G001
Enzymes [BR:
tng01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
GSTEN00003936G001
Peptidases and inhibitors [BR:
tng01002
]
Cysteine peptidases
Family C64
GSTEN00003936G001
Ubiquitin system [BR:
tng04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
GSTEN00003936G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
UN_NPL4
Motif
Other DBs
NCBI-ProteinID:
CAF89901
UniProt:
Q4TB31
LinkDB
All DBs
Position
undetermined
AA seq
1142 aa
AA seq
DB search
MSLLLSSKKKDKRILSGTCPDPKCQARLFFPAHGSGSIECTDCGQRHEQKNLLSVEEVTD
PDVVLHNLLRNALLGVTGAPKKGSELVKVMGLSNYHCKLLSPLLTRYGMDRQSGQARLLR
AMGQGEVFDCSLLGDRAFLIEPEHVSTMGYGRDRSGSLIYLHDTLEEVKKSNGNRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFQQNLDHYKALFQDFVDAAEWEDII
TECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVSEE
QCRGKDGKPNKPICIAWSSSGRNHYIPLVGIKNSVLPRLPARLLPKAWGVPQELIRKYIQ
LEPDGSCVIGGDRSLQDKYLMRLVHAMEEVFMEKHGIQPALVADVHQYVFRRTGVIGVQP
EEVTEAAKKLVLEKRLHRCLSCSALLELHVPQEWLAPGGKLYNLARSTHGQLRADKNYSF
PLNSLVCSYDPQQDLLLPDYTLSSLGTCTWCHGTSVRRIHGNGSVVYLDGDRTSTRSQGG
KCGCGFKHFWEGKEYDNLPEAFPITLEWAGRQVRETVYWFQYEPDAALNSNVYDVATRLV
TKHFPGEFGSEVLVQKVVSTILHHTAKKNPGDYNPVSLDRAHLQHAADAQPPLEPQPPTK
IILTGQKAKTLHKEELTMSRAERGVQQSISEHAAAAQKRHTDRLKQEPKGGTPPEPGSSS
APATPTKSSPAANKEKKIRVSTSDGRQATLTLHAATTFAQLQKSVAKQFGVPAEQQCIRY
GFPPKGLAAPPEGQENEPVALQHGDRVTVEILKGPAHQGPAPSEALGRQQAKSEDGVTSG
RASGRELQESIDLEMSSLCLLATLMGECVCVCARAPLTRRRRRGIGGRGLDLVEQPVSLG
VLCCLTVSAPPGEDVWSYAKTLPHLFQRGGVFYNIVKKDMGASPRSSLPPVGGPGLMDGK
HCTLPHLSGKTFVYNAADERLELCVDAAGHFPVGPDVEERVKGALVQGGARGSREGSPAH
GALRLGSGGVVRKKEQQQNVAAFQGKGHSLGSAGGSSPPEHRPITRQHSSGTDLSASVSR
GAPDLSQIPEDATRELVRMAPGFVTTKEGRGVDPGVMEQQRRKLQEMVSSIQASMERHLK
EQ
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctgctgagctccaagaagaaagataaacggatcctgtcgggtacctgcccg
gacccgaaatgccaggcgaggctgttcttcccggctcacggctccggcagcatcgagtgc
accgactgcggacagcgacacgagcagaagaacctgctgagcgtcgaggaggtgacggac
ccagatgtggtcctccataacctgctccggaacgccctgctcggcgtcaccggggccccc
aagaaaggctcggagctggtgaaggtgatgggtctgtccaactaccactgcaagctgctg
tccccgctgctcacccgctacggcatggaccggcagagcggccaggcccggctgctgcgg
gccatggggcagggggaggtgttcgactgctcgctgctgggggaccgggccttcctgatc
gagccggagcacgtctccaccatgggctacggccgggaccgctccgggagcctcatctac
ctgcacgacaccctggaggaggtgaagaagtccaacggcaacagggagtgtctcatcccc
gtgcacgtggacggagacgggcactgcctggtccacgccgtgtccagggcgctggtgggc
cgggagctcttctggcacgctctgagggagaacctgaagcagaacttccagcagaacctg
gaccactacaaggccctcttccaggacttcgtggacgcggcggagtgggaggacatcatc
accgagtgcgaccccctgttcgtgccgccggaaggcgtgccgctcggcctgcgcaacatc
cacatcttcggcctggccaacgtcctgcaccggcccatcatcctgctggactcgctgagc
gggatgaggagctccggggactactcggccaccttcctgcccggcctggtgtccgaggag
cagtgccgggggaaggacggcaagcccaacaagcccatctgcatcgcctggagcagctcc
ggcaggaaccactacatccccctggtgggcatcaagaacagcgtgctgccccgcctgccg
gcccgcctgctgcccaaggcctggggcgtcccgcaggagctcatcaggaagtacatccag
ctggagcccgacggcagctgcgtgatcggcggcgaccgcagcctgcaggacaagtacctg
atgcggctggtgcacgccatggaggaggtgttcatggagaagcacggcatccagccggcg
ctggtggccgacgtgcaccagtacgtcttcagacgcaccggcgtgatcggcgtgcagccc
gaggaggtgaccgaggccgccaagaagctggtgctggagaagcggctgcaccgctgcctg
agctgcagcgcgctgctggagctgcacgtgccgcaggagtggctggcgccgggcgggaag
ctctacaacctggcccgctccacccacggccagctgagggccgacaagaactacagcttc
cccctcaacagcctggtctgctcctacgacccccagcaggacctgctgctgccggactac
acgctcagctccctcggcacctgcacctggtgccacggcacctcggtgcgccgtatccac
ggcaacggctccgtggtctacctggacggggacagaaccagcacccgctcgcagggcggc
aagtgcggctgcggcttcaagcacttctgggaggggaaggagtacgacaacctgcccgaa
gccttccccatcacgctggagtgggcggggcggcaggtccgggagacggtctactggttc
cagtacgagccggacgcggccctcaacagcaacgtgtacgacgtggccaccaggctggtc
accaagcacttccccggcgagttcggcagcgaggtcctggtgcagaaggtggtcagcacc
atcctgcaccacaccgccaagaagaaccccggcgactacaacccggtgagcctggaccgc
gcccacctccagcacgccgccgacgcccagccgccgctggagccgcagccgcccaccaag
atcatcctgacgggccagaaggccaagacgctccacaaggaggagctgaccatgagccgg
gcggagcgcggcgtccagcagagcatcagcgagcacgccgccgccgcgcagaaacgccac
accgacaggctgaagcaggagcccaaaggcggcacgccgccagaacccgggtcctcctcg
gccccagccacgcccacgaaatcctcccccgctgccaacaaggagaagaagatccgcgtg
agcaccagcgacgggcggcaggccacgctgacgctgcacgccgccaccaccttcgcccag
ctgcagaagagcgtggccaagcagttcggcgtccccgccgagcagcagtgcatccgctac
ggctttccccccaaaggcctggccgcgccgcccgagggccaggagaacgagcccgtggcg
ctgcagcacggcgacagggtgacggtggagatcctgaagggccccgcccaccagggcccc
gccccctccgaggccctcggccgccagcaggccaagagcgaggacggcgtgacgtcgggc
agggccagcggccgcgagctgcaggagagcatcgacctggagatgtcctcgctgtgtctc
ctagcaacgctgatgggtgagtgtgtgtgtgtgtgtgcgcgcgctccgctaacacgccgc
cgccgccgggggatcggtgggcggggcctggacctggtggagcagccggtcagcctgggt
gtgctctgctgcctgactgtctctgctcccccaggtgaggacgtgtggtcctacgccaag
acgctgccacacctgttccagaggggcggagtcttctacaacatcgtgaagaaagacatg
ggtgcgtcgccgcgctcctccttaccgcctgttggcggcccagggctgatggacggcaaa
cactgcaccctacctcacctgagcgggaaaaccttcgtctacaacgcagccgacgagcgc
ctggagctgtgcgtggacgccgccgggcacttccccgtgggccctgacgtggaggagcga
gtgaagggggctctggtgcagggcggggccaggggcagcagggaggggagccccgcccac
ggcgccctgcggctgggcagcggcggagtcgtccggaagaaggagcagcagcagaacgtt
gcagccttccagggtaaaggccactccctgggcagcgccgggggctcctcccccccggag
caccggccaatcacacgccagcacagcagcggcacggacctcagcgccagcgtctccaga
ggagcccccgacctgtcgcagatccccgaggacgccacccgggagctggtgcgcatggcg
ccaggctttgtcaccaccaaggagggccgcggcgtggaccccggcgtgatggagcagcag
cgcaggaagctgcaggagatggtgtcgtccatccaggcctccatggagcgccacctgaag
gagcag
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integrated database retrieval system
