Tetraodon nigroviridis (spotted green pufferfish): GSTEN00004290G001
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Entry
GSTEN00004290G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03020
RNA polymerase
tng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GSTEN00004290G001
09124 Replication and repair
03420 Nucleotide excision repair
GSTEN00004290G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00004290G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00004290G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
GSTEN00004290G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
GSTEN00004290G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-ProteinID:
CAF90169
UniProt:
Q4TAB3
LinkDB
All DBs
Position
undetermined
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKISINKDTKVPNACLFTLNKEDHTLGNIIRAQLMKDPQVLFAG
YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcctcccgcttttgagtcatttcttttgtttgaaggagagaaaaaaattagt
attaataaagacactaaagtgccgaacgcctgtttgttcacgctgaataaggaggaccat
acgttgggcaacatcatccgagctcagctgatgaaggatcctcaggttctgtttgccggg
tacaaagttcctcatcctctggagcacaagattgtgatcagagtgcagaccacgcctgac
tacagtccgcaggaggcgtttacaaatgccatcactgacctaatcagcgaactctctctg
ctggaagaacgcttcagagtggccatcaaggataaacaggaagggatcgagtaa
DBGET
integrated database retrieval system
