Tetraodon nigroviridis (spotted green pufferfish): GSTEN00004505G001
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Entry
GSTEN00004505G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTEN00004505G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tng03009
]
GSTEN00004505G001
03016 Transfer RNA biogenesis [BR:
tng03016
]
GSTEN00004505G001
03029 Mitochondrial biogenesis [BR:
tng03029
]
GSTEN00004505G001
Enzymes [BR:
tng01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
GSTEN00004505G001
Ribosome biogenesis [BR:
tng03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
GSTEN00004505G001
Transfer RNA biogenesis [BR:
tng03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
GSTEN00004505G001
Mitochondrial biogenesis [BR:
tng03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
GSTEN00004505G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Sperm_Ag_HE2
Motif
Other DBs
NCBI-ProteinID:
CAF90279
UniProt:
Q4TA03
LinkDB
All DBs
Position
undetermined
AA seq
354 aa
AA seq
DB search
MLAEVGRPPRSLLVCERSSFLHEQNRLSAQVEQLHFNHKVSVLLPECGSAPSHLEEALDG
FSSFYLIRNLPIYELLDRDFLRAAVFQGSVYGLSHRTRIDEDNCVALLPKGRLVLSLDKD
SYQVLGVQGHASRFNHRAAGRFVVCVDLSDGGGAPGGRSYQRLLTGLRSRLQMKADFLLS
HHPGGGASLQPLLSRYEWSEHRPEVSRRALAELSCPALLTADLQPRDAHAVLEWLGAVDA
AIGCEDPPPSFLSSLACPEPTTTLSGALSVSVCGLLLPHDVHALVQRIRRYLEPPRQPPW
AALTVHGFADAPVCWGGSEHGVLKGGGNFYTLLMFQDHTYQLYLAAGAHDSCPP
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgaggtgggtcgtccgccgcggtccctgctggtctgcgagcggtccagtttc
ctccacgaacagaaccggctctcggcgcaggtggagcagctgcacttcaaccacaaggtg
tctgtgttgttacctgagtgtggttccgccccctctcacctggaggaggccctcgatggt
ttcagcagtttctacctgatcaggaatctgcccatttatgaactgctggacagagacttt
ctgcgggctgctgtgttccagggaagtgtgtacggcctgtcccaccggaccaggatcgat
gaggacaactgtgttgctctgctgccaaaaggccgcctggtcctgtccctggacaaggac
tcctaccaggtcctgggcgtccagggccacgcctcccgcttcaaccacagagccgccggc
agatttgtggtgtgtgtggatctgtccgacgggggcggggccccgggtgggcggagctac
cagaggctgctcacaggtctgcgctccaggcttcagatgaaggccgacttcctgctgtcg
caccacccagggggcggagcctctctgcagcccctcctgtctcgctacgagtggagcgaa
cacagacctgaggtcagcaggcgcgcgctggccgagctgagctgccccgccctcctgacc
gccgacctgcagccacgtgacgctcacgccgtcctggagtggctgggcgccgttgacgcc
gccatcggctgcgaggacccgccccccagcttcctgtcctccttggcttgtcccgagccc
acgaccacgctgagcggcgccctgagcgtctccgtctgcggcctgctgctgcctcacgac
gtccacgctctcgtccagcggatcaggcgctacctggagccgccccgccagcccccctgg
gccgcgctgacggtccacggcttcgccgacgctccggtgtgctggggcgggagcgagcac
ggagtcctgaaaggtggcggcaacttctacaccctgctgatgttccaggaccacacctac
cagctttacctggccgcaggagcacacgacagctgccccccctga
DBGET
integrated database retrieval system
