Tetraodon nigroviridis (spotted green pufferfish): GSTEN00004611G001
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Entry
GSTEN00004611G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K24738
rabconnectin-3b
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
GSTEN00004611G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00004611G001
Membrane trafficking [BR:
tng04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
GSTEN00004611G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_THOC3
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
ASA1
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_2nd
PAC11
EIF3I
Beta-prop_EML
Beta-prop_ACSF4
WDR55
Beta-prop_VPS8
DSE1_N
Ig_LY6G6F
Motif
Other DBs
NCBI-ProteinID:
CAF90360
LinkDB
All DBs
Position
undetermined
AA seq
792 aa
AA seq
DB search
MSGNSLVLPIVLWGRTAPTHCISTVLVMDDFGTIVTGCHDGQICLWDMTPELEICPRAML
LGHTASITCLSKASAGTDKQYIVSSSESGEMCLWDVTDGRCIEFTKLACTHTGIQFYQFT
IGTQREGRLLCNGHYPEVLVMDATSLEVLYSLMSKISPDWISSISIIRSHRTQGEGRGRG
RGRGRGQSWPPACSLGAFLTVESVSFCLDAEDTVVAMSVTGILKVWIITAEVSRMQVHRE
GGPDPGCQSSPLRVRATDGARTRVCVCVCVRTQDLDPVFEEESKPVYCQGCQSISFCTFT
QSSLLVTCSKYWRRGRPGLGGWRVHGSRPGRPLDGGRLRLRLPASFQVSVLRSSSTLGRS
RGRRHLGQSPPLSPLFAVCPPANTSVATWEKRKKAWFLRSSTKLRTAPTNSSSSALRSRA
SSSDAASPFTSCSSRATRQENCPLWSIPDSAPPQPLAPPAELQVSATISLQEAFDKLSPV
SAGIIDQLSVLPGKEEPIKVTASAYIPSQGRLVCGREDGSIILVPATQTAIVQLLQGEHM
LRRGWPPHRTLRGHRNKVTCVLYPYQISPRYDQRSLVSGGVDFSVIVWDIFTGEMKHIFC
VHGGEITQLIVPPENCSVSPAPRPARGGLVTPDLPAVLPRADARAALHLLRGQRPLRRPA
QPQGEEVHHASVAPPLPHPGHQMAPGGRLPGGRLFRRLRLRLADGHRRVGSLRDGDNGGG
DPERLRRAGPGHRGCPEPLGREPEAGHDPPQPGGAEEHGPAQAADPGHQPAGCRQRRQGT
GRRSQEHRARLN
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaacagcctggttctccccatagttctgtggggacgcacggctcccacccac
tgcatcagcaccgtgctggtgatggacgacttcggcaccatcgtcaccggctgccacgac
gggcagatctgcctctgggacatgacccccgagctggagatttgtcctcgggccatgttg
cttggtcacacggcctccatcacctgtctgtccaaagccagcgctggcactgacaagcag
tacatcgtcagttcatccgagagcggggagatgtgcttgtgggacgtgaccgacggccgc
tgcatcgagttcaccaagctagcctgcacccacacgggcatccagttctaccagttcacc
atcggcacccagcgggagggccggctgctctgtaacggacactacccggaagtcctggtg
atggacgccaccagcctggaggtgctgtactcgctgatgtccaagatctcccctgactgg
atcagctccatcagcatcatccgctcccaccggacacagggtgagggacggggacgggga
cggggacggggacggggacagagctggcccccagcctgctcgctgggagcgttcctgact
gtggagtctgtctctttctgtctggatgcagaggacacggtggtggccatgtcggtgacg
gggatcctcaaggtctggatcatcaccgctgaggtcagcaggatgcaggtacaccgggag
gggggtccggaccctggctgccagtcttccccgctgcgtgtcagagccactgatggtgcg
cgcacgcgcgtgtgtgtgtgtgtgtgtgtgcgcactcaggacctggacccggtgtttgag
gaggagtccaaacccgtctactgccagggctgccagagcatctccttctgcaccttcacc
cagagcagcctgctggtcacatgctccaagtactggaggcgagggcgaccaggcctgggc
gggtggagagttcatggctccagaccgggtcgtcctctggacggaggacggctgcggcta
cgtctaccagcttccttccaggtgagcgtcctcaggtccagctccaccctcgggcggagc
cgagggagacgccatcttggtcaaagtccgcctctgtctcccctctttgccgtctgccct
ccagccaacacttccgtagccacgtgggaaaaacgaaagaaggcttggttcctccgctcc
tctacaaaattacggaccgctccgacaaacagctcctcatctgccctccggtcacgcgct
tcttcttcggacgccgcgagccctttcacaagctgctcatccagggcgactcggcaggaa
aactgtcccctgtggagcatcccggacagcgcgcctccgcagccgctggcgccccctgca
gagctgcaggtgtcagccaccatcagtctgcaggaggctttcgataagttgagccccgta
tctgctggaatcatcgaccagctcagcgtgctgcctgggaaagaagagccaatcaaggtg
acggccagcgcctacatcccctctcaaggtcgcctggtgtgcgggagggaggacggcagc
atcattctggtccccgccacgcagacggccattgttcagctgctgcagggggaacacatg
ctccggagaggctggccgccccaccggacgctgcggggacaccggaacaaggtgacgtgc
gtgctctacccctaccagatttccccgcgctacgaccagcgctctctggtgtccgggggc
gtggacttctccgtcatcgtctgggacattttcaccggggagatgaagcacattttctgc
gtccacgggggagagatcactcagcttatcgtcccgcctgaaaactgcagtgtaagcccc
gccccccgccccgcccgaggcggtttggtcacccctgacctccccgctgtgcttccccgt
gcagacgcgcgtgcagcactgcatctgctccgtggccagcgaccactccgtcggcctgct
cagcctcagggagaggaagtgcatcatgctagcgtcgcgccacctcttccccatccaggt
catcaaatggcgcccggcggacgactacctggtggtcggctgttccgacggctccgtcta
cgtctggcagatggacacaggcgcgttggatcgctgcgtgatggggataacggcggtgga
gatcctgaacgcctgcgacgagctggccccggccaccgtggatgccctgagccactcggc
cgtgaacctgaagcaggccatgacccgccgcagcctggcggcgctgaagaacatggccca
gcacaagctgcagaccctggccaccaacctgctggctgcagacaacgccgacaaggtaca
ggccgtcgctcccaggaacacagagcacgcctaaactag
DBGET
integrated database retrieval system
