Tetraodon nigroviridis (spotted green pufferfish): GSTEN00004773G001
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Entry
GSTEN00004773G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14323
protein CASC3
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03013
Nucleocytoplasmic transport
tng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTEN00004773G001
03015 mRNA surveillance pathway
GSTEN00004773G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00004773G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
GSTEN00004773G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-ProteinID:
CAF90477
UniProt:
Q4T9F5
LinkDB
All DBs
Position
undetermined
AA seq
1180 aa
AA seq
DB search
KMADRRRRRRCASQDSEDDDESGSGSDSGRSGSPATKSRGKDSERPEETATQEVAKSDVE
SECESEDGVGEAVLSDYDSADLEENASHSEEVEEEEPAEHYSDEEAPPASGEPNSAAANS
PAKEEEAEAKDEDGQSKEESKSEDKGNLAGERQSGDGQESTDDPETKAAGKAGQKLDDDE
DRKNPAYIPRKGLFFEHDVRGHAQEEERYTAWAHQEDAATPPALSHLSVRRPKTRNRKLW
KDEGRWEHDRFREEEQAPKSREELIAIYGYDIRNGSGSGERSYRQRRPRCSRPQPQYREG
LPGAPQGPKSPPEPSDGGRAVGRGREGPPGVTASTPNSQGSLGEQDLHPSTAAAPPESGL
AKPASQRPQKPRAGGDRAPAGAAASSEPPSAVWEGASPAERPVERKSYSLARRTRSRPAE
LGSKQPSVEDAAATSASSAAGKTWSGPSEGPGQAPGAGPVTELEQDVSRLSLAGQSWSQS
PTSYIRSEMRGEVELLGWSCPRQESGPHALLPPPPRYQQRAPARSPSAVLQHGGDGRGLQ
PGQALLVPAAEGRPGAHAAHAPGGDGGPLLRAHFLPGTDLRPRRWPRPHSTARHAGPAGD
APPPPRPPPPPVRRPHRRPRPLRGPRRFLVTRATAAAAASAFLPSARGHDLPLPDHVPEP
AGELQAVAAWTSTPAARSPDVVLQGQSQVTFGGVTYYDTMQQQAQPKPSPPRRTSQPVTV
KPPPPEERAGSARSCGPRQADPRRGGGWMEVIRDGGPNPGGSTVRSPPRKAPAAAADPDG
PRSSPAGLRRSAAVSRLLHPPVPTPEPPTTSLRTTHQKPVHLLHPAPPAPPPRHRPAMPA
GMKPLEKFLKKQTTALTRAGGFVGGGADKASGTGASRRRASLSRVVPFFRETSPESSQTR
EVFSPDCEDPPSWPSASGPVLVAAPGGATTCGSGDVRSPSLSSDEQSSEASLVAEGGGGG
APMPPDTPDNLALLVLDSVTQKQAGLCTEMLLDDFMLTHPIFLTADRFQQSDEEFRVIGR
FQLLVSSSFRMIQSSGSSSISTTWLLLPKCSLLFPPSPPMACGHMTRRLLDSSSSRFSLE
TEARDRGRGQQAEGEGGEGEAGPDSESDGATDGVRRKRAVLSVAFRYLDTYRELLQEEGD
RSNSFPKVPPAGRHGNGPQQWPAGQSPPCVCVRVCVCVCV
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
aagatggcggaccggcggcgacggaggaggtgcgcgtcccaggacagcgaagacgacgat
gaatctggttctggttcggacagtggaagatctgggtccccagcaactaagagccgagga
aaagactccgaacggcccgaagaaacagcgacgcaggaggtggccaaaagcgatgtggag
tcggagtgtgagagtgaggacggtgtcggcgaagctgtcctctctgactacgacagcgca
gatctggaggaaaacgcttcccattccgaggaagtggaagaagaagagccagcagagcac
tacagtgatgaagaggctcctccagccagcggggagcccaactcagctgctgccaacagc
ccggccaaggaagaggaggccgaggcaaaggatgaagatggtcagagtaaagaggagagc
aagtccgaggacaagggcaacctggctggagagcggcagagcggtgacggccaggagtcg
accgacgacccggaaactaaggccgcaggaaaggctggacagaagctggacgatgacgag
gacagaaaaaacccggcctacatccccagaaagggcctgttcttcgagcacgatgtcagg
ggccacgcccaggaggaggagaggtacacagcctgggcccaccaggaggacgccgccacg
ccgccggccctctcacacctctctgttcgcagacccaagacacgaaacaggaagttgtgg
aaggacgagggccgctgggagcacgacaggttcagggaggaggagcaggcccccaaaagc
cgggaggagctcatcgccatctatggctacgacatccgcaacggcagcggctctggggag
cgctcgtaccgccagcgcagacccagatgcagccgtccccagccccagtaccgagagggc
ctccccggtgccccccagggtccaaaatcgccccccgagccttcagacggaggccgtgct
gtcggcagggggagggaggggccccccggggtcaccgccagcaccccgaacagccaagga
agcctcggggagcaggacctgcacccgagcacggcagccgcacccccggagtcgggcttg
gccaagcctgcgtcccagaggccgcagaagccgcgagcaggcggcgacagggctcctgcg
ggggcggcggcctcttccgagccgccgtcggccgtgtgggagggggcttcccccgccgag
cggccggtggagcgcaagtcgtactcgctggcccgcaggactcgctctcggcccgcggag
ctgggcagcaaacagccgtcggtggaggacgccgccgccacctccgccagcagcgctgca
gggaaaacctggagcggaccctcggaggggccgggccaggcgccgggagcggggccggtg
acggagctggagcaggatgtttcccgcctcagcctggcggggcagagctggagccagagc
cccacctcctacatccgctcggagatgagaggtgaggtggagctgctggggtggagctgc
ccccggcaggagtctggccctcacgctctcctgccccccccccccaggtatcagcaacgt
gcacctgcccggagcccctccgcagttctccaacatggaggagatgggcgtggcctccag
ccgggccaagcgctactcgtcccagcggcagagggccgtcccggagcccacgccgcccat
gcacctgggggtgatggagggccactactacgagcccatttcctaccagggaccgatcta
cgcccacggcgatggccccgcccccattccaccgcaaggcatgctggtccagccggagat
gcacctcccccacccaggcctccacccccaccagtccggcggccccatcgccgaccccgc
cctctacgggggccccgccgtttccttgtcaccagggcaaccgcagccgctgctgcctcc
gcctttctaccctccgcccggggtcatgaccttcccctacccgaccatgtacccgagccc
gcaggtgagctccaggccgtggccgcgtggacctcgaccccagcagcccgctcacctgac
gttgtccttcagggtcagtcccaggtgacctttggtggcgtgacctactacgacaccatg
cagcagcaggcgcagcccaagccttcgcccccccgccgcacgtcccagcccgtcaccgtc
aagccgcccccaccagaggagcgggcggggtcagcgaggagctgtggtcctcgccaagct
gaccctcggaggggcggcggctggatggaggtgatccgggacgggggacccaacccggga
ggatcgaccgtccgatcgccccccaggaaggcgcccgctgccgcggccgacccggacggt
cctcgctcctccccggcggggctccggcgcagcgccgccgtgtcgcggctcctccacccg
ccggttccgacgccggagccgcccaccaccagcctccgcaccacccaccagaagcccgtc
catctcctccacccagcgccccctgccccccctcctcgacaccgtcccgccatgcctgcg
gggatgaaaccgctggagaagttcctgaagaagcagaccaccgcgctgacccgggccggg
ggcttcgtgggcggcggggcggacaaggccagcggcaccggcgcgtcccgccgcagggcc
agtctgtcccgggtcgttccgttcttcagggagacgtcaccggagagcagccagactcgc
gaggtgttcagccccgactgcgaggaccccccctcctggccctcggcctcaggaccggtc
ctggtggcggcgccgggcggcgccaccacgtgtgggtccggggacgtccgcagcccgtct
ctgtccagcgacgagcagagttccgaggccagcctggtggcggagggcggcgggggaggc
gcgccgatgccccccgacacccccgacaacctggccctgctggtgctggacagcgtcacc
cagaaacaagctggactctgcacagaaatgctgctggatgacttcatgctgacccatccc
atcttcctgacggccgacaggttccagcagtcagacgaggagttcagggtcatcgggagg
tttcagcttctagtttcttccagtttcaggatgattcagtcttcagggtcctcgtcaata
tcaacaacatggctgctgcttcccaaatgttccctcctcttcccgccgtcgcccccgatg
gcctgtggtcacatgaccaggcggctccttgactccagctcctccagattcagcctggag
acggaagcgagggaccgggggcgtggccagcaagcagagggcgagggtggcgagggggag
gcggggccagacagcgagagtgatggagccacggatggcgtgcggaggaagagggcggtg
ctgagcgtggcgttcaggtacctggacacgtacagagagctgctgcaggaggagggcgac
cgcagcaacagcttccccaaggtaccgcccgcaggtcgtcatggcaacggcccacagcag
tggcctgcaggacaatcacccccgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtg
tag
DBGET
integrated database retrieval system
