Tetraodon nigroviridis (spotted green pufferfish): GSTEN00004780G001
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Entry
GSTEN00004780G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K09371
LIM homeobox transcription factor 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00004780G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
GSTEN00004780G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Swc3_C
Motif
Other DBs
NCBI-ProteinID:
CAF90481
UniProt:
Q4T9F1
LinkDB
All DBs
Position
1
AA seq
281 aa
AA seq
DB search
MRHLEGSAVLRDWSKSGRPPETAVSSGRDSYCVPGRTTIGVWPAPLPRTQVMVMMKMRRR
KKKKKKRKKRKGQQGQQTEQRVLKSSRASVLKAPRTILTKQQRRTFKASFEVSSKPCRKV
RETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQQQQEQQQQAQEQSKLSSHVIAPPC
GRVAAELECLGSSYTHPPQHQQQMGLTNLEQQDYDMDPFRQGLTPPQMPGDHMHPYGFSG
LYPETDPLCHLTDSDCLPPGDPSLLTPIDRLYSMQDSYFTS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatctggaaggttctgctgtgttgagagactggtcgaagtccggccgaccaccg
gagaccgctgtgtcctcagggagggacagctactgtgtgccagggaggactaccatcggt
gtctggccagccccacttcctcgtacacaggtgatggtgatgatgaagatgaggaggagg
aagaagaagaagaagaagaggaagaagaggaaggggcagcagggacagcagacagaacag
cgagtgctgaagagcagcagagcaagcgtcctaaaagcgccacgcactattctgacaaaa
cagcagagacggaccttcaaagcctcgtttgaggtgtcgtccaaaccctgcagaaaggtg
agggagaccttggcagcagagactggcctgagtgtccgggtggtgcaggtctggttccag
aaccaaagagccaagatgaagaagcttgccaggaggcagcagcagcaacagcagcaggaa
cagcagcagcaggctcaggaacagagcaagctctcatcacacgtcatagcgcccccgtgt
ggcagagtggccgctgagctggagtgcctgggctcctcgtacacccatcctccacagcat
caacaacagatgggactcactaacctggagcagcaggactacgacatggaccccttcaga
cagggcctgaccccacctcagatgccaggggatcacatgcacccctatggtttcagtggc
ctgtatcctgagacagaccctctgtgtcatttgactgacagcgactgtctgcctccgggg
gacccctcccttctcacccccattgaccgcctttactccatgcaggactcctacttcacc
tcc
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