Tetraodon nigroviridis (spotted green pufferfish): GSTEN00004971G001
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Entry
GSTEN00004971G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K24260
WD repeat-containing protein 11
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00004971G001
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tng03037
]
GSTEN00004971G001
Membrane trafficking [BR:
tng04131
]
Endosome - Lysosome transport
Others
Others
GSTEN00004971G001
Cilium and associated proteins [BR:
tng03037
]
Other cilia and associated proteins
Other cilium assembly proteins
GSTEN00004971G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
TPR_WDR11
WD40_CDC20-Fz
Beta-prop_WDR11_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
WD40_WDHD1_1st
WDR55
Beta-prop_VPS8
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
TPR_GEMI5
RAB3GAP2_N
CxC2
WDR54
DraK_HK_N
Motif
Other DBs
NCBI-ProteinID:
CAF90621
UniProt:
Q4T911
LinkDB
All DBs
Position
17
AA seq
1221 aa
AA seq
DB search
MIPYTVNIKLAARTLTGTLNLQNKTAVDWGWQGLIAQGCHSSILIIDPKTAQTIQVLEKH
KATVVKVKWSRENYYHNLSSPYCLRLASGDASGKIIVWDVVSGTAHCEIQEHSKPIQDLE
WLWNQDASRDLLLAIHPPNYIVLWNGDTGTKLWKKSYAENILSFSFDPFDPSNMALLTSE
GIVFITDFTHSKPPSSSGKKVYIASPHASPAHAKPAPAAAPAPTGAKKALNKVKVLITNE
KPTAEAVTLNDCLQLSYLPSKRNHMLLLYPREILILDLELSQTVGVVAIERSGVPFIQVI
PCAQRDALYCLHENGCITLRVCRSTTTTPEEGADPEQSVHELVYDLRSQCDAIRVTKTVR
PYRMVICPINENSAALMVGDGRVMLWELKAHSVKAAANPSSGLSPLYSPVSFCGAPLGPN
QKKIQDLSLNSMIGPTLIPGEVPPPSSNQQEIQLKFLLTGLLSGLPLPPFAIRMCPPLTT
KNINHYQPLLAVGTSNGSVLVYNLTSGLLHKELSVHSCEVRGIEWVSLTSFLSFATSSPN
NMGLVRNELQHINLPTGRCFAFRGERGNDEPPIEMIKVSHLKQYLVVVFRDKPLELWDIR
TGTLLREMAKNFPTVTALEWSPSHNLKSLKKKQMAAREAIARQTVSDAEQSSVESSVISL
LQDAESKSETSQAISAREHFVFTDTDGQVYHITVEGNTVKDGARIPPDGSMGSIACIAWK
GDTLVLGDVDGNLNFWDLKARLSRGIPTHRGWVKKIRFAPGKGNQKLLVMYADGAEVWDT
KDVQMVSSMRVGRNMNYRVLDIDWCTSDKVVLASDDGCVRVLEMAMKSASYRMDEQDLTD
PVWCPYLLVPRAALTLKAFLLLQPWSGTFTMDITQVDYNEKEEIKGLIQEQLNSLSNDMK
SVLQDPELSLLQRCLLVSRLFGDDSDLQFWTVASHYLQSFAQARQLSVATADGQVQSEAT
QPSPQNHLDICHDVLCESSYFQKFQLDRVHLQEVKRSSYEHTKKCADQLLLLGQTDRAVQ
LLLETSADNPSYYCDSLKACLVTTITSSGPSQSTIKLVATNMIANGKLAEGVQLLCLIDK
AADACRYLQTYGEWNRAAWLAKVRLSPAESADVLKRWAEHLCSPQVNQKSKAILVLLSLG
CFYKVGEMLHSMRQFDRTALFIEACLKYGVMEANEASLAHKLIEAAFVDYARLLRSLGLR
EGAALWASRAGTAGEQLMEEL
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgtacactgtcaatattaaacttgcagctcgaacgttgactggcactcttaat
ttgcagaataaaactgccgttgactggggttggcaggggctgatagctcaaggatgtcac
tccagtattctcatcattgatccaaagacagcccagaccatacaggttttggagaagcac
aaagccacagtggtgaaggtgaaatggtcgagggaaaactactaccacaacctcagctca
ccgtactgtcttcgcctggcttcgggagatgcttcgggcaagatcatagtgtgggatgtg
gtgagtggcacggcccactgtgagatccaggaacactccaaacctatccaggacttggag
tggctgtggaatcaggatgcatctcgtgatctgctgttggccattcacccacccaattat
attgttctgtggaatggagacacaggcactaagctgtggaaaaagagctatgctgagaac
atcctctctttctcttttgacccttttgacccctccaacatggcactgctgacaagtgaa
ggaatagttttcatcacagacttcacccactccaaaccacccagcagttctggtaaaaag
gtctacattgccagcccccatgcaagccccgcccatgccaagcctgcacccgctgctgcg
ccggccccaactggtgctaagaaggccctcaataaggtcaaagtgctgatcaccaatgaa
aaacccactgccgaggcggtgacgttgaacgactgtctccagctgtcctatctgccatcc
aagaggaatcacatgctgctactttatccacgagagattctcatcttggatctggagctc
agtcagactgtaggcgtggtggccattgaacgctctggtgtgcccttcattcaggtgatc
ccatgtgctcagcgggacgccctttactgtctccatgagaacgggtgtataaccctgaga
gtgtgtcgctccaccaccaccaccccagaggaaggagcagaccctgaacagagcgtccat
gagctggtgtatgatttgcgttctcagtgcgatgccatacgagtcacaaagacagttcgc
ccttaccgtatggttatctgccccatcaacgagaacagtgcagcactaatggttggggat
ggacgggtaatgctgtgggagctcaaagcccacagcgtcaaggcagctgctaatccaagt
tcgggtctttcaccgctctactcccccgtgtccttctgcggtgctccactgggtccaaat
caaaaaaagattcaggatctctcccttaacagcatgattggaccaactttgattcctggt
gaggttcctcctccatcatcgaaccagcaggagatccagctgaagttcctgctgactggc
ctgctttctggtctgccgctcccaccgttcgcaattcgcatgtgtcccccccttacgacc
aaaaacatcaaccactaccaacccctgctggctgtaggcaccagcaacggctctgtactg
gtttataacctaaccagtggcctccttcacaaagaactcagtgtccactcctgtgaagtc
agggggattgaatgggtgagccttaccagtttcctatcctttgccacttcttctcccaat
aacatgggcctggtgcgaaatgaactgcagcacatcaacctgcccactggtagatgtttt
gctttcaggggggagcgaggaaacgacgaaccgcctattgagatgattaaagtgtctcat
cttaagcagtacctggtggtggtgttcagagacaagcctttggaactgtgggacatcagg
acagggacccttctccgggaaatggctaaaaacttccccacagttactgcactggaatgg
tcgccatcccacaatcttaagagcctgaagaagaagcagatggcagccagagaggccatt
gctcggcagacagtgtcagacgctgaacagagtagcgttgaatcctcagttatcagcctc
ttgcaggatgctgagagcaagtcagagacaagccaggccatctcagccagggagcatttt
gttttcaccgacactgacgggcaggtctaccacatcaccgtagagggcaacacggtcaaa
gacggtgcacgaatcccccctgatggaagtatgggcagcatcgcctgcattgcctggaaa
ggggacaccctggttcttggggacgtggacggcaatctcaacttctgggacctcaaagcg
cgtttgtccaggggtattccgacgcatcgtggctgggtgaagaagattcgcttcgcccca
ggtaaaggcaaccaaaagcttcttgtcatgtacgcagacggtgccgaagtctgggacacc
aaagacgtccaaatggtcagcagcatgagggtcggtcgcaacatgaactaccgggttctt
gacattgactggtgcacatcagacaaggtcgtgctggcctccgacgacggatgtgtccgg
gtgttggagatggccatgaagtccgccagttaccgtatggatgaacaagacctgactgat
ccagtttggtgtccttacctgctggtgcctcgagctgctctcacactcaaagctttcctc
ctgctgcagccctggtctggaaccttcaccatggacatcacccaagttgactacaatgaa
aaggaggagataaaaggtctgatccaggagcagctgaactctctgtcaaatgacatgaag
agtgtgctgcaggaccccgagctcagcctgcttcaacgctgcctcctggtgtcacggctg
tttggagacgactcggaccttcagttctggacagtggcgtcccactaccttcagagcttt
gcccaggcccgtcagctgagtgtggcgaccgcagatgggcaggtccagagtgaagcaacc
caaccatcacctcaaaaccacctggacatctgccatgatgtcctgtgtgagagctcctac
tttcagaaattccagctggatcgagttcacctgcaggaggtgaagcgctccagttacgag
cacactaagaagtgcgctgaccagctcctcctgctgggccaaacagaccgggcggtgcag
ttgctgttggagaccagtgccgacaatcccagctactattgtgattcactcaaagcttgc
ctcgtcaccactatcacttcatcgggaccttcacagtccacaatcaaactagtggccacc
aacatgattgccaacggcaagctagcagagggggtgcagctgttgtgtttgattgacaag
gcagctgatgcttgtcgctacttgcagacctacggggagtggaaccgcgctgcctggctg
gctaaggtgcgtctgagcccggctgagagcgcggatgttctgaagcgctgggcggaacac
ctgtgttccccacaagtcaaccagaaatccaaagccatcctggtgctgctttctctgggc
tgcttttacaaagtgggagagatgcttcatagtatgaggcagttcgatcgcaccgccctc
ttcatcgaagcctgtctcaagtatggagtgatggaggcaaatgaagcttcgcttgcacat
aaactcatcgaggctgcttttgtggactacgcgcggctgctgcgctccctgggcctgagg
gagggcgctgccctgtgggcatcccgggccggcaccgctggggagcagctgatggaggag
ctg
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integrated database retrieval system
