Tetraodon nigroviridis (spotted green pufferfish): GSTEN00005073G001
Help
Entry
GSTEN00005073G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tng03016
]
GSTEN00005073G001
Enzymes [BR:
tng01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GSTEN00005073G001
Transfer RNA biogenesis [BR:
tng03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GSTEN00005073G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-ProteinID:
CAF90688
UniProt:
Q4T8U4
LinkDB
All DBs
Position
undetermined
AA seq
585 aa
AA seq
DB search
MLPLKEKDKPLVRKLLAAGCCARCVLRFCCVSVQAAYRKRSGSFELCLRSRSRVPQAPPR
DAAPRVLRAQRSRRSRRANGPSYSFQRTPVPQGRLLLARSRACAWPVWGSCRSSVTSPRR
QRCVCIAAAVRAERYEFDSLVLSVSLPAQLGVREVSLRLSLLREPEGLTWVSSAPAALLL
APREEGSEVKVFLMQKAGNGWFLTWLVPQGQVPHAQQGRRGPGEGGLQVGHARPAGQGAG
RRCRGYQEFVRGRRGVQPPPDGRRLSLPVSLEPQSPLPGSPPPITTLVCACVCVCVCVCV
CVCVCVCSASTCPSCFKPTKNKQSVFTRMAVVKALDKISDLAFLKHYPSPPAPVSSRCVL
QDVQCLHTSLFIAGRYNKFSRNLPQTPWLIGGERRMESSVEELIAAPILATFRTDGFNFS
SSGREDVDVRTLGTGRPFAVELLNPHRSRVSRAEMRQLQEQTINSSSDKIRVRDLQMVTR
EATSRMKEGEEEKTKSYTALVWTHKALQREDLSFIDDIKDLTLNQKTPLRVLHRRALAVR
QRLVHSMSARFVDPHHFLPGPEDAGGDVHQGVCPRGLWTHQTQHV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctctgaaggagaaggacaaacctctggtccggaagctgctggcggcgggctgc
tgcgctcgctgcgtcctcaggttctgctgcgtcagcgtccaggctgcctaccggaaacgc
tccgggagcttcgagctttgcttgaggtcccggtccagggttccccaggcccctccgagg
gacgcggctccccgggtgcttcgggcccagaggtccaggcggagccgccgagcaaacggg
ccaagctacagcttccagaggaccccggtgccccaggggaggctgctgctggcgcggagt
cgcgcgtgtgcgtggcctgtctgggggtcctgcaggagttctgtgacgtcgcccaggcga
caaaggtgtgtgtgtatagcagcagccgtcagggcggaacgctacgagtttgacagcctg
gtgctgtccgtgtctctgcccgctcagctgggggtccgagaggtcagtctgcgtttgagc
ctcctcagagagcctgagggtctcacctgggtttcttctgcccctgcagcactcctgttg
gctccacgtgaagaaggaagtgaggtaaaggtgtttttgatgcaaaaagccgggaatggg
tggttcctgacctggctcgtccctcagggacaagtgcctcacgctcaacaaggacgacgt
ggtccaggtgaaggaggccttcaagtgggtcatgcaaggcctgctggccaaggagctggg
cggcgttgccgtggttaccaagagtttgttcgaggtcggcgtggagttcagccaccccca
gacggacgccgactgtcacttcctgtgagtctggagccacagtcacctcttcctgggtcc
ccacctccgataaccacgctggtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtctgcagcgcgtccacatgtcccagctgtttcaaacccaccaag
aacaaacagtcggtgttcacacggatggcggtggtcaaagctttggacaagatttccgat
ttggcttttttaaagcattacccgtcaccgccggcgcccgtgtccagccgctgtgtcctg
caggacgtccagtgtctccacacctcgctcttcatcgcaggcaggtacaacaagttctcc
cggaacctccctcagacgccctggctgattggcggtgagcggaggatggagtcgtcggtg
gaggagctgatcgccgctcccatcctggccaccttccgaaccgacggtttcaacttctcc
tcgtccggccgggaggacgtggacgtgcggacgctggggaccggtcgtcccttcgccgtg
gagctgctgaaccctcacaggtccagggtcagccgagcggagatgaggcagctccaggag
cagaccatcaactcctcttcagacaaaatccgggtgcgagacctgcagatggtgaccagg
gaggccaccagccggatgaaggagggggaggaggagaagaccaagtcctacacggcgctg
gtctggacccacaaggcccttcagagggaagacctgagcttcatcgacgacatcaaagat
ctgaccctgaaccagaagacccccctgagggttctgcaccggcgggccctggcggtgcgt
cagaggctggtccacagcatgagcgccaggttcgtggacccccaccacttcttacctggg
cctgaagacgcaggcggggacgtacatcaaggagtttgtccacggggactttggacgcac
caaacccaacatgtgtga
DBGET
integrated database retrieval system
