KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00005198G001
Entry
GSTEN00005198G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04114  Oocyte meiosis
tng04120  Ubiquitin mediated proteolysis
tng04218  Cellular senescence
tng04310  Wnt signaling pathway
tng04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    GSTEN00005198G001
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    GSTEN00005198G001
   04340 Hedgehog signaling pathway
    GSTEN00005198G001
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    GSTEN00005198G001
   04218 Cellular senescence
    GSTEN00005198G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tng04121]
    GSTEN00005198G001
   03036 Chromosome and associated proteins [BR:tng03036]
    GSTEN00005198G001
Ubiquitin system [BR:tng04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     GSTEN00005198G001
Chromosome and associated proteins [BR:tng03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     GSTEN00005198G001
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_C Beta-prop_WDR3_2nd WD40_CDC20-Fz EIF3I DSE1_N WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-TrCP_D Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_Aladin CFAP251_N ANAPC4_WD40 F-box-like Beta-prop_DCAF12 Beta-prop_IP5PC_F WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_SPT8 PAC11 NBCH_WD40 ASA1 Beta-prop_DCAF4 Beta-prop_VPS8 WD40_like Beta-prop_IFT140_1st Beta-prop_HPS5 F-box Beta-prop_WDR11_2nd Beta-prop_Nup120_160 Beta-prop_NOL10_N WD40_RFWD3 Beta-prop_WDR19_1st WD40_2 DUF6188
Other DBs
NCBI-ProteinID: CAF90785
UniProt: Q4T8J7
LinkDB
Position
1
AA seq 440 aa
VVGSRKRPSQGNYEKEKEHCITLFDQWSEADQVEFVERLISRMCHYQHGHINSYLKPMLQ
RDFITALPAQGLDHIAENILSFLDARSLCSAELVCKEWQRVISEGMLWKKLIERMTIEAN
WRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKILTGHTGS
VLCLQYDDRVIVTGSSDSTVRVWEVKTGEVLNTLIHHNEAVLHLRFANGLMVTCSKDRSI
AVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH
KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYD
GKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNV
STNGQPEGRSPSRTYTYISR
NT seq 1320 nt   +upstreamnt  +downstreamnt
gtagtgggctctcgtaagcgaccgtcacaaggaaactatgagaaagagaaggaacactgc
atcaccctctttgaccagtggtcggaggccgaccaggtggagtttgtcgagcgcctgatc
tcccgcatgtgccactaccagcacggccacataaactcctacctcaaacccatgctgcag
agggacttcatcactgcgttgccagcccaagggttggaccatatagcagagaacatcttg
tcgtttctggatgcccgctctctatgctcagcagaactggtgtgtaaggaatggcagagg
gtcatctctgagggcatgctgtggaagaagctcattgagcgaatgactattgaagcgaat
tggcggtgtggaagacacaacttacagaggattcagtgtcgctcagaaaacagtaaaggc
gtgtactgtctccaatatgacgatgacaagatcatcagtggccttagggacaattcaatt
aagatctgggataaacagagtctggagtgtctgaagattctgaccgggcacacaggctca
gtattgtgtctgcagtatgacgacagggtcattgtcaccgggtcttctgactcaactgtc
agagtttgggaggtgaaaacgggcgaggtactgaacacgctgatccaccacaacgaggcc
gttcttcatctacgcttcgctaatggcctgatggtcacctgctccaaggaccgctccatc
gctgtctgggacatggcctcgccgaccgacatcagcctacgccgcgtcctcgtgggacac
cgagcggctgtaaacgtggttgactttgatgacaaatatattgtatcagcctcaggggac
cgcaccatcaaggtatggagcaccagcacatgtgaatttgtgcgcacactaaacggtcac
aaacgggggatagcctgtctacagtaccgagatcgtctggtggtcagtggctcctctgac
aacacaatccggttatgggacattgaatgtggggcatgtttgcgagtcctggaaggtcat
gaggagcttgtgcggtgcattcgctttgacaacaaaaggattgtcagcggtgcttatgat
ggtaaaattaaggtctgggatctccaggcagccttggacccccgggcacctgccagcaca
ttatgtctgcgtactctagtggagcattctggaagagtgttccgtcttcagtttgatgag
tttcagatcatcagcagttctcatgacgacaccattctgatctgggatttcctgaacgtg
tccaccaacggccagccagaggggcggtctccctcccgcacttacacctatatttctaga

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