Tetraodon nigroviridis (spotted green pufferfish): GSTEN00005199G001
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Entry
GSTEN00005199G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K03265
peptide chain release factor subunit 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSTEN00005199G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00005199G001
03012 Translation factors [BR:
tng03012
]
GSTEN00005199G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
GSTEN00005199G001
Translation factors [BR:
tng03012
]
Eukaryotic type
Release factors
GSTEN00005199G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-ProteinID:
CAF90786
UniProt:
Q4T8J6
LinkDB
All DBs
Position
1
AA seq
443 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYVLRVHGAESNGAENDEKILYLTPEQEKDK
SHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMEYQGDDDEFFDLDDY
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagcgcggcggacaggaacgtggagatatggaaaattaagaagctg
attaaaagtttagaagctgcccgtggtaatggaaccagtatgatctcgctgatcatccct
cccaaggaccagatatccagagtggccaagatgttggccgatgaatttggaacagcttca
aacattaagagtcgagtcaacagactctctgtacttggggccatcacttctgtacagcaa
agactaaaactatacaacaaagtgccaccgaatggtttagttgtgtactgtggtactata
gtgacagaggagggcaaggagaaaaaagtcaatatcgactttgagccttttaagccaatc
aacacctccctctatctctgcgacaacaagtttcacacagaggccctgacagccctgctc
tcagacgacagtaagtttggctttattgtgatcgacggcagcggcgctctgtttggcacg
ctgcagggcaacaccagggaggtgttacacaagttcaccgtggacttacccaaaaagcac
ggcagaggtgggcagtctgccctacgttttgctcgcctgagaatggagaagagacacaat
tatgtaagaaaagtggctgagacggctgtccagctgtttgtgtccaacgataaagtgaat
gtggccggaatggttttggccggctctgccgacttcaagactgagctcagccagtctgac
atgtttgacccaaggttacaagccaaggttctgaagcttgtagacatctcttatggagga
gagaatggcttcaaccaggccatcgagctctcagcagaggttctctctaatgtcaaattc
atccaagagaagaaacttatagggcgatactttgatgagatcagccaggacacggggaag
tactgttttggagtagaggacacactcaaggccctggagatgggagcggtggagatcctc
atagtctatgagaacttggacaccatgcgttacgttcttcgtgtgcacggagcagagagc
aacggagctgagaacgatgagaagattttgtacttaacgccggagcaggagaaagacaaa
tctcatttcacagacaaggagacggggcaggaacacgagctgattgagagcatgccgctg
ctggagtggttcgctaacaactacaagaaatttggggccacgttggagatagtcacagac
aaaagccaggagggttcccagtttgtcaagggctttggcggtattgggggtatcttgcga
tacagagtggatttccagggcatggagtaccaaggagatgacgatgagttcttcgatttg
gatgactac
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integrated database retrieval system
