Tetraodon nigroviridis (spotted green pufferfish): GSTEN00005370G001
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Entry
GSTEN00005370G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K20225
capicua transcriptional repressor
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00005370G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
GSTEN00005370G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-ProteinID:
CAF90910
UniProt:
Q4T872
LinkDB
All DBs
Position
8
AA seq
1369 aa
AA seq
DB search
LSSAVWTNVEPRSVPVFPWHSLVPFLAPTQSDASSQLGEGPHPVNHPQAASLKSVFLCCF
QSATGAAALSQEPAEAPPAAERGPLLPPPPSSEEAPSEKEKGEAERERPDSETESDVDDP
FLPGVVPEPPLSTSPVKRRTQSLSALPKDGDKNSPGKVGTSALLHQRQTPLLSPDVISPS
QILFTRFQREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEK
QKYHDLAFQVKEAHFKAHPDWKWCNKERKKSSSEGRGVPGGKDIRERSMSESTEPHSVDL
KGVGPSLVGVSERNAGEARPRALSQSAMHSFERGDRGNTQALAELAQVGSPAGTREPRVF
HFPFSLKMCGDGGSQFSSHTPTLSQSQRGVSEDMTSDEERMVICEEEGDDDVIEDPYPSS
SIDLKCKERVTDSDSENGSGDEGERKVRRQNSLQKYVLFNASNLKENLFFSPPQGVFAPV
ICSSASSSSTQHASHGRSISLSSYPNSKRYDEGRPAGGGFSDHRRKERGDVESKGAFLGE
DGGGVQAASFSLSSGQSLLSTSQAGVTLSSSVSSLGANPLLGIGTVRVASTVVTNVMRPV
ISTPLPIASKPRDGGTSSSPLPPERKSLTPQQHQPQLLIGTGGGAAASGGGYYSASSPNP
VGSGPGGVVTNLVLGGALSAQPAVQLITPTPQPQSSQQQTLSSNAVSASPHQTNGPLPLP
LLQPQFLPASSLAPPVGKAITQVQYILPTLPANSHPKSPPRHLSQTTSIFNLPPAPPTHA
SLANGKQQVTSAVTGYTSSQTVGVVSPGARVQTQSPVLQGKMLVPMATVRTAPAPAQQFP
IVTPALPVQNGSQTGSKIIQIAPMPVVQSPLPQGGAVHPSNAFPVTVGTAAVVAPGSAPS
QTVLLPPAPTRITYVQSTPGVPSTLPLVPTTTGSSTTQQALPVAGSAYVPSALATLGFTA
IAPPGQTLVQPLITGQPPLLAPSQSPSPSTSVPVSGSQIVTAVYPPSPSVTMATGVVSMT
AVPPSVVHSVSGPANAPPHILTKHTAAAVTHAHPPLQADPATERHVDRPAERQTDRQTER
QAEMLLQTSQKVKATLANIPVGNYEGGGRGKEREKDKERDKEKEREAAGSGHFSFDAQSS
PSTHLAEEPPSERAPESSGTADPAESRSRDGTAAKEVRGTPDTRSPLTTGCCRRCISRSA
SRSCRSSDRRRFCLLPPCKAWPPRPAPSWGATGARGRTPQIWTRRLTNRFLRRGRVGGAR
AAARSPTHPRVPPNARETSFTFDRPGTEGEDILTDLEFDKVPYSSLRRTLDQRRALVMQL
FQEQGFFPSAQATAAFQTRYSDIFPTKLCLQLKIREVRQKIMQTATPSD
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttccgcagtgtggaccaatgtggagcccagatcagttccagtcttcccctggcat
tcgttggtgccctttctggcacccacccagtctgatgcttcttctcaactgggagagggt
ccgcacccagtcaaccacccgcaagcagccagtctaaagtcagtctttctctgctgtttt
cagagtgccacgggggcggcagctctgtcacaggaacctgccgaggcacctcctgctgcc
gagagaggacccctcctgccgcctccgccctcatctgaggaagcgccttcagaaaaggag
aaaggggaggcagagagagagaggcccgacagcgagacggaaagtgacgtggatgacccc
ttcctcccgggagttgtgccagagccgcccctctctacatcgccagtgaaaagacgcacc
cagtccctcagtgcactgcccaaagatggcgataaaaacagccctggcaaggttggcacc
tcggcgctccttcaccagcgtcaaacacctctgctcagtccagacgtcatctcaccttct
caaatattgtttacacgctttcagagggagaaggaccacatccgaagaccaatgaatgcg
tttatgatcttcagtaagcgtcatcgcgccttggtacaccagcggcacccgaaccaggac
aacaggacggtcagcaagattctgggggagtggtggtatgccctcggccccaaggagaag
caaaagtaccacgatttggcattccaggtaaaagaagcccactttaaggcccacccggac
tggaagtggtgcaacaaagagaggaagaagtccagctcggagggtcgcggagtgccagga
gggaaagacatccgagagaggagcatgtctgagtccacagaaccccattctgtggatctg
aagggggttgggcccagtctggtgggagtttctgagaggaatgcaggagaagcccgtcca
cgagccctctctcagagtgccatgcacagctttgagcgtggcgacaggggtaacacacaa
gccctggcagagctggcacaggtaggatcaccggcaggaacccgggaacctcgtgtcttc
cactttccattttctttgaagatgtgtggagacggtggcagccagttttcaagccacacc
ccgacgctgtctcagtcccaacggggggtcagcgaggacatgaccagtgacgaggagcgg
atggtcatctgtgaggaggagggagacgatgatgtcattgaagacccttaccccagcagt
tccatagaccttaaatgtaaagagagagtgacagacagtgacagtgagaatggatctgga
gatgaaggtgaacggaaggtaaggaggcagaacagtttgcagaaatatgttttgtttaat
gcatcaaatttaaaagagaacctttttttctcccccccccagggggtttttgctccggtt
atttgttcctctgcatcatcttcttctacacaacatgcctctcatggcaggagcatctca
ctgtcatcgtacccaaacagtaagcgttacgatgaggggagaccagctgggggagggttt
tccgatcacaggaggaaggaaagaggagacgtagagagtaaaggtgcatttctgggggag
gacggaggtggggtgcaagccgcttctttctccctctcctctggtcagtcactcctttcc
acgtctcaggcaggggtgacgctctcttcatcagtgagttcgttgggtgcaaacccgctc
ctgggcattggaactgttagggtggcctccacagttgtgacaaacgtcatgcgccccgtt
atcagcacgccgctgcccatcgccagcaaacccagagatggaggcacgtcatccagcccc
cttccacccgagcgcaagtctttgactccccagcagcaccagccccagcttttgattggc
accggaggcggggccgcagctagcgggggcggctactactctgcgtcgtcgcctaacccg
gtcggctcgggtcccggcggtgtggtgactaatctggtgttaggaggagctttatctgcc
cagcctgccgtgcagctcatcacccccaccccccagccgcagtcttcccagcagcagacg
ctctcctccaatgcggtttcagcatcgccccatcagaccaacgggcccctgcccctgccc
ctgcttcagccccagtttcttcctgcctcgtctttggcgccccctgtgggtaaggccatc
acgcaggtgcagtacatcctgcccaccctccctgccaacagccaccctaagagtccccct
agacaccttagccagacaaccagtatcttcaaccttcccccagcaccgcccacacacgcc
tccttggccaatgggaagcagcaggttaccagtgcggtgactggttacacatccagccag
acggtgggagtcgtcagcccaggagcgcgagtgcaaacacagtctccagttctacagggt
aaaatgcttgttcctatggcaacagtgcggactgcaccagctccggcccagcagttccca
atagtgaccccggctcttccagtccaaaacgggtctcagactggaagtaagatcatccag
attgctcccatgccagtggtgcagtccccgttgccacagggcggggctgtccacccctcc
aatgcctttcctgtaactgtgggcacagcggctgtggtggctccaggttcggctccttct
caaaccgtcttgctgccgcccgcaccgaccaggatcacctatgtccagtctactccaggg
gtcccatctactctgcctcttgtccccacaacaacgggctcttcaaccactcagcaagcg
cttccggtggctggatctgcctatgttccctccgctctggcaacactgggcttcacagcc
atcgcgccacctggacagacactggtccagcccctcatcacaggtcagccaccacttctg
gccccttcgcagtctccctcgccctccacctcagtcccagtttcagggagccagatagtc
actgccgtttaccctccctcgccaagcgtcaccatggcaaccggggtggtctccatgaca
gcagtaccccccagtgtggtgcactcggtctccggccccgctaacgctccccctcacatc
ttgaccaaacacacggcggccgcggtcacgcacgcacacccaccgctccaagcggaccca
gcgacagaaagacacgtggaccgaccggccgagcgacagacggacagacagactgagagg
caggcagaaatgctcctgcagacctctcagaaggtgaaggcaacgctggcaaatatcccc
gtgggaaactatgaaggaggaggccgaggaaaggagagggagaaggacaaggagcgagac
aaggagaaggagagagaagctgcaggcagtggccatttctccttcgacgctcagtcctct
ccgtcaacacatctggctgaggagccgccctctgagagagccccggagagctccggtacc
gcagatcccgctgagtcgcggagccgcgatggcaccgctgccaaggaggtgagaggaacg
ccagacacccgctcacctctgacgactgggtgctgtcggaggtgtatttcgaggagcgct
tcgcggagctgccggagttccgaccggaggaggttttgccttctcccaccttgcaaagcc
tggccacctcgccccgcgccatcctggggagctaccggcgcaagaggaagaactccacag
atttggactcggcgcctgacgaacaggtttctccgaagaggaagagtcggcggcgctcga
gctgcagctcggagcccaacacacccaagagtgccgccaaatgcgagggagacatctttc
acctttgacagaccaggcacagaaggggaagacatcctgacggacctggagtttgacaag
gtgccgtactcctccctgcggagaacgctggaccagaggcgagcgctggtcatgcagctg
tttcaggaacagggcttttttccgtcagctcaggctaccgcagccttccagacccgatac
tccgacatctttcccaccaagttgtgtctgcagctgaagatccgggaggtccggcagaag
atcatgcagacggccactccctccgat
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