Tetraodon nigroviridis (spotted green pufferfish): GSTEN00005724G001
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Entry
GSTEN00005724G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04080
Neuroactive ligand-receptor interaction
tng04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GSTEN00005724G001
04082 Neuroactive ligand signaling
GSTEN00005724G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00005724G001
Ion channels [BR:
tng04040
]
Ligand-gated channels
GABA-A
GSTEN00005724G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-ProteinID:
CAF91158
UniProt:
Q4T7H4
LinkDB
All DBs
Position
undetermined
AA seq
514 aa
AA seq
DB search
GQTKSDERIYPENFTHILDQLLDGYDNRLRPGFGGRVTEVKTDIYVTSFGPVSDVEMEYT
MDVFFRQTWVDRRLMYEGPVEILRLNNLMVTKVWTPDTFFRNGKKSVAHNMTAPNKLFRI
MKNGTILYTMRLTISAECPMKLVDFPMDRHACPLKFGSYAYPKTEMIYTWTKGPQHSVEV
PPESSSLVQYDLIGQTVSSETIQSITGEYVVMTVYFHLKRKIGYFLIQTYIPCIMTVILS
QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL
IEFAAVNYFTDEQIKRPKGKLAKCPPVPQTTPVKVKDTQEVLQNPNTNLRKRVNNSSYQA
SSGQQRAQSTTNISGMAKVRCSQPLASGANCSSSSLIHSSPKSLSLLSVASSSAQLVQNI
PQPAASTPDVTTQKIQNQTTNTSSLHHLLGPKLEHVQMMGNKVELKQTPCSQPTTAGING
TSKIDKYARIFFPVSFGAFNIVYWVIYLSRDTME
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
ggacagacaaagagcgatgaaaggatttatccggagaacttcacccacattttagaccaa
cttttagatggctatgacaaccgactgagacctggatttgggggtcgtgtaactgaggtc
aagacagacatatatgtgacaagttttgggcctgtctcagatgttgaaatggagtacacc
atggacgtcttttttagacagacatgggtggaccgaaggttgatgtatgagggcccagta
gagatattaaggttgaacaatttgatggtgactaaagtgtggacccccgacaccttcttc
aggaatgggaaaaagtcagtggctcacaacatgacggcccccaacaaactcttccgcatc
atgaagaacggcactattttatacaccatgaggctgacaattagtgctgagtgtccaatg
aagcttgtggatttccccatggacagacatgcatgtcccctcaagtttggaagttatgcc
tatcccaaaaccgagatgatctacacatggaccaaaggcccgcagcactcagtggaggtt
cctcctgagtcctctagccttgttcaatatgatctcattggccagaccgtgtccagcgaa
accattcagtcaatcacaggtgaatacgtggtgatgacagtctacttccacctaaaacgc
aaaatcggctacttcttgattcaaacgtatattccgtgcataatgactgtaatcctgtcc
caagtgtccttctggataaataaagaatcagttcctgctcgcaccgtctttggcatcact
acagtcctcactatgacaacgctgagcatcagtgcccgtcactcgcttcccaaggtctca
tatgccacggcgatggactggttcattgctgtctgcttcgcctttgtcttctcagctctt
attgaatttgctgctgttaactactttactgatgaacagattaaacgtcccaaagggaag
ctggccaaatgtcctccggtacctcagaccacacctgtgaaggtcaaggacacacaggaa
gtgctccagaatcctaatacaaacctaaggaaacgtgtgaataacagttcctaccaagca
tccagtggtcaacaacgagctcagtcaactaccaatatttcaggaatggctaaagtgaga
tgttcgcaacctcttgccagtggagccaattgtagttcctcgtccctcattcactcaagc
cccaaatctttgagccttctcagcgtggcctcctcttctgcccagctggtgcagaacata
ccgcagcccgcagcttccacaccagatgtgactacccagaagatacagaaccagactacc
aacacttcatctttgcaccacttgttgggacccaaactggagcatgtccagatgatgggg
aacaaagtggagctaaagcagaccccctgctctcagcccaccactgcaggaatcaatgga
acaagcaagattgacaagtacgcacggatcttttttccggtgtcctttggggcttttaac
atagtctactgggtgatttatttatcaagggatacgatggag
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