Tetraodon nigroviridis (spotted green pufferfish): GSTEN00005778G001
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Entry
GSTEN00005778G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10839
UV excision repair protein RAD23
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03420
Nucleotide excision repair
tng04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GSTEN00005778G001
09124 Replication and repair
03420 Nucleotide excision repair
GSTEN00005778G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tng03051
]
GSTEN00005778G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00005778G001
Proteasome [BR:
tng03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
GSTEN00005778G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
GSTEN00005778G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
UBA_3
Rad60-SLD_2
Crinkler
Dsc3_N
OTU1_UBXL
Ubiquitin_2
Motif
Other DBs
NCBI-ProteinID:
CAF91196
LinkDB
All DBs
Position
undetermined
AA seq
320 aa
AA seq
DB search
MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
EYKIDERNFVVVMVSKVGAGNQTHRPTVSSRPLAFCSSSDGSQGLDASSALVTGAEYEAM
LTEIISMGYERERVVAALRASFNNPHRAVEYLLTGIPSSPVQESNPPAQAPAPLPTESPA
SPAEGCFPACPGENPLAFLRNQPQFLHMRQAIQQNPNLLSALLQQLGQENPQLLQQINQH
QERFIQMLNEPVGEGGELGAAGEEGSSVNYIQVTPQEKEAIERFKALGFPEALVIQAYFA
CEKNENLAANFLLNQGLEDD
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacacttaaaacgctgcaacagcagactattcagattgagatagatccagaa
caaacggtgaaggctttgaaagagaagatagaagcagaaagaggaaaagataatttcccc
gtatccggtcagaagttgatatacgctgggaaaatcctccaagatgacacaccgattaag
gagtacaaaatcgacgagaggaactttgtggtggtgatggtgtctaaggtgggagccgga
aaccaaacacaccggccgactgtctcatctcgtcctctcgcgttttgcagctccagtgat
ggaagccaaggcctggacgcctcttcagcgctcgtgacgggagccgagtacgaggccatg
ctgacggagatcatctccatgggctacgagcgggagcgggtggtggcggcgctccgggcc
agcttcaacaacccccacagagccgtggagtacctgctcaccggtattcccagcagtccg
gtccaggagagcaaccctcctgcgcaggccccagcgcctctccccacagagtctccagcg
tctccggcagaaggctgtttccctgcgtgtccaggagagaaccctctggccttcctgagg
aaccagccgcagttcctccacatgaggcaggccatccagcagaaccccaacctgctgtcg
gccctgctgcagcagctgggccaggagaacccgcagctcctgcagcaaatcaaccagcac
caggagcggttcatccagatgttgaacgaacccgtcggggagggcggagagctgggggcc
gcgggcgaggagggctcgtccgtcaactacatccaggtcacacctcaggagaaggaagcc
atcgaaaggtttaaagctttaggtttcccggaggctctggtcatccaggcctacttcgcc
tgcgagaagaacgagaacctggcggccaacttcctcctcaatcaggggctcgaagacgac
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