Tetraodon nigroviridis (spotted green pufferfish): GSTEN00006401G001
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Entry
GSTEN00006401G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tng03016
]
GSTEN00006401G001
Enzymes [BR:
tng01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GSTEN00006401G001
Transfer RNA biogenesis [BR:
tng03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GSTEN00006401G001
Prokaryotic type
GSTEN00006401G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Frankia_peptide
Motif
Other DBs
NCBI-ProteinID:
CAF91572
UniProt:
Q4T6B0
LinkDB
All DBs
Position
undetermined
AA seq
375 aa
AA seq
DB search
MLAVGPALGAFVSRRVASERTGFLSRCVYRMSGESKVDLKIQQVKRDQEVDEDSVAKRRK
TDVEQSQEDRRYPKKKVALLLAYSGKGYYGMQRNPGSSEFRTIEDDLVAALVKSGCIPEN
HAEDMKKMSFQRCARTDKGVSAAGQVVSLKLWLIDDLAEKINQHLPPQIRVLGVKRVTQG
FNSKNNCDARTYAYMLPTVAFAPKDSDAASDAASFRLQPETLQRVNRLFALYKGTHNFHN
FTSQKAPNDPSARRYVTHVCCGEPFMGGDTEFAVITVRGQSFMLHQIRKMIGLVIAVVKG
YAREEVHFDRYNKRFGGDGLHERLEWEEQGDAIQAFKEAFIYPTITETERREGSMVSWMN
TLPIHDFEATAAEAG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgctagcggttggacccgcacttggtgcctttgtaagccggagagtggcgtcagagagg
acagggttcctgtctcggtgcgtctacaggatgtctggagagtccaaagtggatctgaag
atccagcaggtgaagagagaccaggaggtcgatgaagactcggtggcaaagaggaggaag
acggatgtggagcagagtcaggaggacaggaggtatcccaaaaagaaggtcgccctgctc
ctggcctactctggaaagggctactacggcatgcagaggaaccctggatcttcagagttc
aggaccatcgaggacgacttggtggccgcgctcgtcaagtctggctgcatccctgaaaac
catgcagaggacatgaagaagatgtccttccagaggtgtgcaaggacagacaagggggtg
tctgccgctggtcaggtggtgtctctgaagctctggctgatcgacgacctcgccgagaaa
atcaaccaacatctgcctccacagatccgagtgctgggggtgaaacgggtgactcagggt
tttaattccaaaaacaactgtgacgcgcgcacgtacgcgtacatgcttccaacggtggcc
tttgctccaaaagactcggacgctgcctcagatgctgccagcttccgcctgcagccggag
acgctgcagagggtcaaccgtctgttcgcgctctacaagggaacccacaacttccacaac
ttcacctcccagaaggcacccaacgaccccagcgctcggcgctacgtcacacacgtgtgc
tgtggcgagcccttcatgggcggcgacacagagttcgccgtgatcacggtgcgtgggcag
agtttcatgctccaccagatcaggaagatgatcgggctggtgatcgccgtcgtcaagggc
tacgctcgggaggaggtccactttgaccgctacaacaagcgctttggtggggacgggctg
cacgagcggctggagtgggaggagcagggggatgctatccaggcattcaaggaggcgttc
atctacccaaccatcacggagacggagcggcgggagggatccatggtcagctggatgaac
acgcttcccatccacgactttgaggccactgcggctgaagcagga
DBGET
integrated database retrieval system
