Tetraodon nigroviridis (spotted green pufferfish): GSTEN00006460G001
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Entry
GSTEN00006460G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00006460G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
GSTEN00006460G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-ProteinID:
CAF91617
UniProt:
Q4T665
LinkDB
All DBs
Position
undetermined
AA seq
322 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGTGNTNTSGTGGNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSENEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLAPGGNGMGAGVGVGVGAGLGGGVNQRMDSYAAHMNGWSNGGYGMMQDQL
SYQHPGLNAHNPGQMQSMHRYDMSALQYNSMTSSQSYMNGSPTYSMSYSQQSTPGMTALG
SMGPSSVVKSESSSSSPPVVTSSSHRAAPGCQSGDLRDMISMYLPGTEVSEQGAQTRLHM
PGHYQSTVPGTTINGTLPLTHM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagccaccggctccccagactaacacggggggc
accggcaacaccaacacgtccggaaccggcggaaaccaaaagaacagcccggagcgggtc
aagagacccatgaacgccttcatggtctggtcccggggccagaggaggaagatggcgcaa
gaaaaccccaaaatgcacaactcggagataagcaagaggctgggcgcagagtggaaactt
ctgtcggagaacgagaagagacctttcatcgacgaagccaagaggctgcgggccctgcac
atgaaggaacacccggattacaaataccggccccggcgaaaaaccaagaccctgatgaag
aaggacaagtacaccctgcccggcgggctgctggcacctggcggcaacgggatgggcgcc
ggggtcggtgtgggcgtcggggccggcctcggcggcggcgtcaaccagaggatggacagc
tacgccgcgcacatgaacggctggtccaacggtggctacggcatgatgcaggaccagctg
agctaccagcacccgggcctgaacgcgcacaacccgggccagatgcagtccatgcaccgc
tacgacatgagcgcgctgcagtacaacagcatgaccagctcccagagctacatgaacggc
tccccgacctactccatgtcctactcccagcaaagcacgccggggatgaccgccctgggc
tccatggggccctcctcggtggtcaagtccgagtccagcagctccagcccgcccgtcgtc
acctcctcgtcccaccgggccgccccgggctgccaaagcggggatctgagggacatgatc
agcatgtacctgccggggacggaggtcagcgagcagggggcccagaccaggctacacatg
cctgggcactaccagagcaccgtgcccgggacgacgatcaacggcacgctgcccttaaca
cacatgtaa
DBGET
integrated database retrieval system
