Tetraodon nigroviridis (spotted green pufferfish): GSTEN00006548G001
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Entry
GSTEN00006548G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K12587
exosome complex component MTR3
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTEN00006548G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00006548G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GSTEN00006548G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-ProteinID:
CAF91679
UniProt:
Q4T603
LinkDB
All DBs
Position
undetermined
AA seq
276 aa
AA seq
DB search
MPTDTRRVRGPELSQSPWLFVRKPADAAPPPGPRADGRQREQADVRPVFVRCGLGSQAKG
SAYMEAGATKLLCCVYGPRETERKDETDMRCGRLTADVRFAPFSCPERGSWIQGSQDRDF
SSMLLESLQPAVCLHRYPRSQIEVHLVVLENGGSVLAHAVTCASVALADAGIQMYDLVLG
CSLRQDGASFVADPTYAEESGRAGPGGPRGGLTVAFLPSLNQISGLRSDGEMAEDTLRAG
VRTCIEGCYKLYPVVRQVLSRCVRRAAAPPSADAAS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcccacggataccaggcgtgtgcgcgggcccgagctctcccagagtccgtggctgttc
gtgcgcaagccggcggacgccgcgcccccgccgggccccagagccgacggtcggcagcgg
gagcaggcggacgtcaggccggtgttcgtgcgctgcggcctggggagccaggccaagggc
tccgcctacatggaggccggggccaccaagctgctgtgctgcgtttacggaccccgagaa
acggagaggaaggatgagacggacatgagatgtggcaggttgaccgctgacgtgcgtttc
gccccgttctcctgccccgagaggggctcctggatccaggggagccaggacagggatttt
tccagcatgctgctggagagcctgcagccggccgtgtgcctccaccggtacccccgctcc
cagatcgaggtgcacctggtggtcctggagaacggcggctccgtgctggcccacgccgtc
acctgtgcctctgtggcgctggccgacgccggcatccagatgtacgacctggtgctgggc
tgctccctccgccaggacggcgcctccttcgtggccgaccccacctacgccgaggagagc
ggccgggccgggccgggcggcccccggggcggcctgacggtggccttcctgcccagcctc
aaccagatctccgggctgcggtcggacggagagatggcggaggacacgctgagggccggg
gtccgcacctgcatcgagggctgctacaaactctacccggtggtccggcaggtgctgagc
cggtgtgtccgcagggcggcggccccgcccagcgcagacgcagcctcctag
DBGET
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