Tetraodon nigroviridis (spotted green pufferfish): GSTEN00006617G001
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Entry
GSTEN00006617G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16499
protocadherin delta 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00006617G001
Cell adhesion molecules [BR:
tng04515
]
Cadherins
Protocadherins
GSTEN00006617G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-ProteinID:
CAF91722
UniProt:
Q4T5W0
LinkDB
All DBs
Position
1
AA seq
805 aa
AA seq
DB search
LVICLLLCACVVDLVLAQIRYSIPEELEHGAFVGNIAEDLGLDVAKLSARRFRIVSGAKK
QYLEVNLENGILFVNEKIDREELCERSPSCFLHLQVVIENPLELYRVEVEILDVNDNSPS
FPWSEFNLDITESAAPGSRFPLESAQDQDVGSNSLRSYTLSANAHFVLNIQTRNDGSKFA
ELVLDTQLDREQQKKHEMVLTAFDGGSPERSGTALITVTVLDANDNVPVFDRSVYRASLV
ENAPRGTLVLKLNATDLDEGSNGEVTYAFSGHAPLKVRELFNVDPYTGEIRVKGVVDYEK
ASVYELFVQAKDRGPRRWRCTEDAPPGTVIAVISVMDRDSAENGNVDCQIPSNVPFQLHS
SFRNYYTLVTSEYLDREAVSEYNITLTARDLGAPSLSTRKTILVQVSDINDNPPRFSQPS
YTVYVTENNAPGASICSVSAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYA
LRSFDYEQLRNFQILVQAQDAGFPPLASNITVNVFVLDQNDNAPVIVSPLPKNGSVAAEV
VPRSVDAGYLVTKITALDADAGQNSRLSYQVLQATDPGLFSVALYTGEIRTIRRVVEKDA
TRHRLVILVKDNGQPSLSATVSLVLTVVDSVPESLSDFGDLTLSPQPPSNLALYLIVSLS
TISLIFLVAIIVLAAIKCYKDRETVSGYNLPPFACCCCGGFQPEPPPEVFKKSNLNLQIS
SATKVPTNCMEVNGNSTLSQSYCYKVCLTPESAKSDFMFLKPCSPGSTPRNNEAKSAECS
WNAQSRCSSVNNGATTPNEVQSEKC
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
ctggttatatgtctgcttctgtgtgcgtgtgtagtggacctggtcctggctcagattcgt
tactccatccccgaggagctggaacatggagctttcgtgggcaacatcgccgaagacctg
ggtctggacgtggccaagctgtcagcgcgtcgctttcgcatcgtctccggcgcaaagaaa
cagtacttagaagtgaacctggaaaacggcatcctgtttgtaaacgagaaaattgacagg
gaggagctgtgcgagcggagccccagctgttttttgcacttacaagtggtgattgaaaac
ccgttagagttatacagagtggaagtggagattctagatgtcaatgacaactctcccagc
ttcccgtggagcgagttcaatcttgacatcacggaatcggctgcgcctggctcgcgtttc
ccgttggaaagcgcgcaggaccaggacgtgggcagcaactctctgcgctcctacacgctc
agtgccaacgcgcacttcgtgctcaacatccagacgcgcaacgatgggagcaagtttgca
gagctcgtcctggacactcagctggaccgggaacagcagaaaaaacacgaaatggtcctg
actgcttttgacggggggtctccagaacggtccgggacagctctgataactgtcaccgtg
ttagacgccaacgacaacgtccccgtgtttgaccgctccgtgtaccgggcgagcctggtt
gagaacgcaccgagggggacactggtgctgaagctgaacgccacagacctggacgagggc
tcgaatggagaagtgacctacgcgttcagcggtcacgcgccgctcaaagtgcgcgaactg
ttcaacgtggacccgtacacgggagaaattcgagtgaaaggcgtcgtggactacgagaaa
gccagcgtgtacgagctgttcgtgcaggcgaaggatcggggaccccggcggtggcggtgc
acagaggacgccccgccgggcacggtgatcgccgtcatcagcgtcatggatcgcgactcg
gcggagaacgggaacgttgactgtcaaattccgagcaacgtccccttccagttgcactca
tcgtttagaaattattacactctggtgacaagcgagtacctggacagagaagcggtgtct
gagtacaacatcacgctcacagcccgagacctgggcgccccctcgctctccaccaggaaa
actattctcgtccaagtgtctgacatcaacgacaaccccccgcgcttctcccagccttca
tacactgtttatgtgaccgagaataacgcccccggcgcttccatttgctccgtgagcgcg
ttcgaccccgattccaaccagaacgcctatctgtcttattccatcctggagggtcagatc
cagggcatgcccgtgtccacttatgtatcaatcaactccgacaacggcaatatctatgca
ctgcgctcttttgattacgagcaacttagaaactttcagatcctggtgcaggcgcaggac
gccggcttcccgccgctcgccagcaacatcacagtcaacgtctttgtcctggaccagaac
gacaacgcgcccgtcattgtgtccccgctccctaaaaacggctccgtggccgcagaagtg
gtgccacggtcagtggacgctgggtacctcgtgactaaaataaccgcgttagacgcggac
gcggggcagaactcccggctgtcctatcaggtgttgcaggcgacagacccggggctgttc
agcgtggctctctacaccggagaaatcaggaccattcgccgagtggtggaaaaagatgcc
acaagacacagactggtcatcttagtgaaggacaacgggcaaccgtcgctctccgccacc
gtctccctcgtcctcacggtggtcgacagcgtgccggagtcgctgtcagatttcggggac
ctcacgctgagcccacagccgccctccaacctcgctctttacctgatcgtgtccctgagc
accatatctctcatattcctggtggcaataatcgtgctggctgcgatcaagtgctacaag
gacagggagaccgtgagcggctacaacctgccgccgttcgcctgctgctgctgcggggga
tttcagcccgagccgcccccagaggtgttcaaaaaatccaacctcaacctgcaaatttca
tcggccactaaagtgcccacgaactgcatggaggtgaatggaaacagcactctgtcacaa
tcatactgttataaagtgtgcctgactcccgaatcagccaaaagtgacttcatgtttctg
aagccgtgcagccccggcagcacaccgaggaacaacgaggccaagagcgcggaatgttcg
tggaacgcgcaaagccggtgctcgtctgtgaacaatggcgcgactactcccaatgaggta
cagtcagaaaagtgc
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