Tetraodon nigroviridis (spotted green pufferfish): GSTEN00006997G001
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Entry
GSTEN00006997G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00006997G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
GSTEN00006997G001
Surveillance factors
Other surveillance factors
GSTEN00006997G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-ProteinID:
CAF91982
UniProt:
Q4T550
LinkDB
All DBs
Position
undetermined
AA seq
1135 aa
AA seq
DB search
VDVRNMTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYVKDNK
VPEDMQDKEFAAILQDEPMQPLALVPLTEEEQVRGTTRRPGGNPFFFFPPTFLTFRSLRS
PQRNFSMSVNSAAVLRLMGKGVGGAAPAGVVRGRGATRGGRGRGRGEGGFYQRSIEEAEG
GFGRSVREIHRSQSWDDRGERRFEKPLRREAGRPGFEESAGPVGPGRKDYTRADSDNWRT
LREEQDEDEGESGNNWRLSGPRRDGRNNASACYGPRSAGWRDHAGPGESRRRKFDFDFRD
SEGHGGSGGRRRAGSDGLEDERDGLPEWCTDEEDGEMGTFDSTGAFMPMKKGGKETILEE
ELEFKGIEEEEEESHAEERSNAEGDKDKGELRPMSVEVPSHPESKEAAAPSAADSETKPA
PSSPSPPAHSSPPLVEPRPSAAPPAVENSQKNNSLPVQASNAPTEDGVSVGNSKAQASPS
PAATSTPSSSLPPPPPSSVLPLLPPTGGDAEDDEGMKHLQQEAEKMVASLQDTSLEEECF
TQALQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMTLLVK
RGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLGNLDQERLKKQQELAAAAALYQQLQQQQ
IFQLINRCSESGMMPSMNRSMSVPDTGSMWDMHTSASQPSGGEASLWDITMNPSTQGPTM
EQLQKLGLLVAFQLQQDRRDAELRAKREEEEQRKRREEKRRQQEEQKRREEEELFRRKQV
GRSFWWFLHFKNDSKRGRRYDGNMRLPCLPQCRQQQELIMKLLQQAPQQQGPGAGSSGWS
GASSSGLTKAGKPPALALLEMQQEAERAPHSGLSMGSSSLGSQWSDGVGMWGGPGSLDGK
GVSGGSSSSMGMWDEAVKNQASLRGNTNNNMGLKNSRSSPSLSEQYMMRRKRTDEEEKLL
KLLQGMKPQDGFTTWCEQMLHTLNTSANNSSSSLDVATIVAYLKEVESPYAVLDFIRSYL
GDTVEAKEFAKQFLERRAKQKANQQRQQQQLSKEVAGLNMNFPLQDSMRGMNPSTLQSMF
QANHMGKAGLYDNQGGKMKKKQPLMLHSDPSILGYSFHNAGECLSLNEMEMVEDY
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtgaggaatatgactgctgagactctcaacttcggcccagaatggctccgtgca
ctgtccagtggggggagcgtgacgtccccccctccttcccccgccatgccaaagtacaag
ctggccgagtaccgctacggccgagaggagatgttagcactttatgtcaaagacaacaag
gtcccagaggacatgcaggataaggagtttgctgctattctgcaagatgagcccatgcag
ccgctggccctcgtgcctctcaccgaggaggagcaggtccgcggcacaactcgccgtcca
gggggaaatccgtttttttttttcccgcccacatttctgacgtttcgctctctccgttct
ccacagaggaatttctccatgtctgtgaacagcgcggctgtgctgaggctcatgggaaaa
ggggtgggcggggccgcgccagccggggtggtcagaggaagaggggccacgcgaggcggc
cgaggacgaggtcgcggcgagggtggattctaccaaagaagtattgaagaggcggagggg
ggttttggccgcagcgtgcgagagatccatcgcagccagagctgggacgaccggggcgag
cggcgtttcgagaagccgctgcggcgggaggcggggcgccccggcttcgaggagtcggcg
ggtcccgtgggtccggggaggaaggactacacaagggctgacagcgacaactggcgcact
ctccgggaggagcaggacgaggacgagggggagtcgggcaacaactggagactctctgga
ccccgcagggacggtaggaacaacgccagcgcttgttatggcccccgctcagcaggctgg
cgggaccatgccggtccaggtgagagccgccgcaggaagttcgactttgacttccgggac
tcggaaggccacggcggcagcggcgggcgccggcgtgcgggcagcgacggactggaggac
gaaagggacggcctgcccgagtggtgcaccgacgaagaggacggcgagatgggcactttc
gactccactggtgctttcatgccgatgaagaagggcggcaaagagacaatcctggaggag
gagttggagtttaaggggatcgaagaagaggaggaggagagccacgctgaggagaggagc
aacgcagaaggagacaaggacaaaggtgagctcagaccgatgtccgtggaggttcccagt
catccagaaagcaaagaagccgccgctcccagcgcagcggacagcgaaacaaagccagca
ccctcgtccccttctcctccagcccacagcagccctccgctggtggagccccggcccagc
gcggcccctccggcggtggaaaactcccagaagaacaacagcctccctgtccaggccagc
aacgcgcccactgaagacggggtctctgtagggaactccaaggcccaagccagtccaagc
cctgctgctacttccactccctcatccagtttgccgcctccgcctccttcctcggtcctc
cctctcctcccaccaaccgggggagacgccgaggacgacgagggcatgaagcacctgcag
caggaggccgagaagatggtggcgtcgctgcaggacacctctttggaggaggagtgcttc
acccaggctctgcagcagcaggagagcaggaacacggcagccgccctgccgctgtcgcac
gaggccgccatgaagtggttttacaaggacccgcagggagagatccagggtccgttcacc
acggtggagatgtgcgagtggttccaggccggctacttcaccatgaccctcctggtgaag
cggggctgcgacgagggcttccaacccctgggcgacgtcatcaagatgtggggccgcgtg
cctttcgccccggggccctctccgccacccctgctgggtaacctggaccaggagcgcctg
aaaaaacaacaggagctggcagcagccgcggcgctttatcagcagctccagcaacagcag
atattccagctcatcaacaggtgcagcgagtcggggatgatgccttcgatgaacaggtcg
atgtcagtgccagatacagggtccatgtgggacatgcatacctcagcttcacagccgtca
ggcggtgaagccagtctttgggatataacaatgaatccttctactcagggtccaactatg
gaacagcttcaaaagctaggtctccttgtggcgtttcagctccagcaggataggcgagac
gctgaactcagggcgaagcgtgaggaagaggagcaacgcaagaggagggaggagaagagg
aggcagcaggaagagcagaaaaggagagaggaggaggagctcttcaggcgcaagcaggtg
ggaaggagcttttggtggtttttacattttaaaaatgacagtaaaagaggaagaagatat
gacggtaacatgcgtctgccgtgtctccctcagtgtcgccagcagcaggaactgatcatg
aagttgctgcagcaggcgccccagcagcagggtcctggggcggggagctcaggctggtcc
ggggcatcctcctctggcctcaccaaggcgggaaagccgccggcactggctcttctggaa
atgcagcaggaagccgaaagggctcctcactctggcttgtcgatggggagttcctccctg
gggagccagtggagcgacggcgtgggcatgtggggcgggcccggcagcttggatgggaag
ggagtcagcggaggctcctccagcagcatgggcatgtgggacgaggcggtaaagaaccag
gccagcctccgtggcaacaccaacaacaacatgggcttgaagaacagccgtagcagcccc
tctctcagcgaacagtacatgatgcggcgcaagcggacggacgaggaggagaagctgctg
aagctgctgcagggcatgaagcctcaggacggcttcaccacctggtgtgaacagatgctg
catactctcaacacctctgccaacaactcctcctcctctctggatgtcgccacaatcgtg
gcctacctaaaggaggtggagtctccctatgcagtgctggactttatccggtcctactta
ggggacacagtggaagccaaagagttcgccaaacagtttctggagcgacgtgccaaacag
aaagccaaccaacagagacagcagcagcagttatcaaaggaagtggctggattgaacatg
aacttccctctgcaggactccatgcgaggtatgaatccaagcaccctgcagtccatgttt
caagccaaccacatgggcaaggctggtctctacgacaaccaaggggggaagatgaagaag
aaacagcccttgatgctgcactctgaccccagcatcttagggtactcattccacaacgcg
ggcgagtgtctgagcctgaacgagatggagatggtggaggattactga
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