Tetraodon nigroviridis (spotted green pufferfish): GSTEN00007243G001
Help
Entry
GSTEN00007243G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00007243G001
Enzymes [BR:
tng01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
GSTEN00007243G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
GSTEN00007243G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
PA
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
Prok-RING_4
RINGv
FeoB_associated
zf_RING_Vps8_fungal
DUF7027
Hemotin
zf-RING_4
PHDvar_NSD
PHD
zf-RING-like
DNA_ligase_ZBD
LapA_dom
zf-C3H2C3
SIT
TMEM156
Motif
Other DBs
NCBI-ProteinID:
CAF92164
UniProt:
Q4T4L8
LinkDB
All DBs
Position
undetermined
AA seq
306 aa
AA seq
DB search
RRPCLVPPQVLNAQKAGYRAAIVHNVNSDDLISMGSNDGEWPLAPPSSSSSSSSTSSSWG
LMPFLLLSLEVDVMKQIDIPSVFVSEETANSLKGGYLYDKGGHLVLMPDFSLPLEYYLIP
FLIIVGICLILIVVFMITKFVQDRRRARRSRLHKDQLKKLPIHKYKKGDSYDVCAICLDE
YEDGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDSEEGDSGPDEN
EASESTPLLRSLASTSAHSFGTMSAGSRSEHDQESSEYDEELDSSEEEEEEEEVTVETVV
VQMQPP
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
cgccgtccttgtttggttcccccccaggtcctcaacgctcagaaggcggggtaccgggca
gccatcgttcacaatgtgaactcagacgacctgatcagcatgggatccaacgatggtgag
tggccgctagcacctccatcctcctcctcctcctcctcctccacatcctcctcctgggga
ctgatgccgtttcttcttctctctcttgaagtggacgtcatgaagcagatcgacatcccc
tcggtgtttgtgagcgaggagacggccaactccttgaagggaggctacctttacgacaag
ggcggccacttggtcctcatgccggatttcagcctccccctggagtactacctgatcccc
ttcctcatcatcgtgggaatttgccttatcctcattgttgttttcatgatcaccaagttc
gtccaggaccgacgccgagctcgccggagccgcctgcacaaggatcagctgaagaaactg
cccattcacaagtacaagaaaggggacagctacgatgtctgcgccatctgcctggacgaa
tacgaagacggggacaagctccgggtcctgccctgctctcacgcctaccacagcaagtgc
gtggatccgtggttgaccaaaaccaagaagacgtgcccggtgtgcaagcagaaggtggtg
ccctcgcagggcgactccgactccgactcggaggagggcgacagcggccccgacgagaac
gaggcgtcggagagcacgccgctgctgcgctcgctggcctccaccagcgcgcactccttc
gggaccatgtcggcagggtcgcgctccgagcacgaccaggagtcctccgagtacgacgaa
gagctggacagcagcgaggaggaggaggaggaggaggaggtgaccgtggagacggtggtg
gtgcagatgcagccgccc
DBGET
integrated database retrieval system
