KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00007267G001
Entry
GSTEN00007267G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:tng00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tng03036]
    GSTEN00007267G001
   03400 DNA repair and recombination proteins [BR:tng03400]
    GSTEN00007267G001
Chromosome and associated proteins [BR:tng03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    GSTEN00007267G001
DNA repair and recombination proteins [BR:tng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     GSTEN00007267G001
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd WDR55 ANAPC4_WD40 EIF3I Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_DCAF12 Beta-prop_HPS5 WDR90_beta-prop_4th B-prop_COPA_B_2nd Beta-prop_ELP1_1st Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_SPT8 RMC1_N
Other DBs
NCBI-ProteinID: CAF92184
UniProt: Q4T4J8
LinkDB
Position
undetermined
AA seq 325 aa
MEVLSLVQRVSAHPDSRCWFVSWNPAGTLLASCGGDKAIRIWAREGDSWICKGTLEDGHQ
RTVRKVAWSPCGNYLASASFDATTCIWKKKNDGFESLTVLEGHENEVKCVAWASSGNLLA
TCSRDKSVWVWEVDEEDDYECVTVINSHTQDVKHIVWHPNQELLASASYDNNICIYKEED
DDWECCATLKGHTSTVWSLCFDAAGKRLASCSDDCTVKIWKEYSSENTQDSSWKCVCTLS
GYHGRTVYHVDWCSLTGALATACGDDAVRVFKEENTSDPDQPVFFLAAQVTKAHSQDVNC
VAWNPKEAGLLASCSDDGEIAIWQL
NT seq 975 nt   +upstreamnt  +downstreamnt
atggaggttttgtccctggtccagagagtcagcgctcacccggactctcgttgttggttc
gtgagttggaacccggcaggaacgttgctagcctcgtgcggaggcgacaaggccatccgg
atatgggcacgagaaggtgattcttggatatgtaaagggacgcttgaggatggacaccag
cgcactgttagaaaagtggcgtggtctccctgtgggaattacttggcatctgccagcttt
gatgcgactacgtgcatctggaagaagaagaatgatggcttcgagagtttgactgtgttg
gaaggtcatgagaatgaagttaaatgtgtggcatgggcatcgtctgggaatttgctggca
acatgtagccgagacaagagtgtctgggtttgggaagtggatgaagaagatgactatgag
tgtgttactgtaataaactctcatacacaagatgtcaaacatattgtgtggcaccctaac
caggagctactagcatcagccagctatgataacaacatctgtatttacaaagaagaggat
gatgactgggagtgttgcgccacattaaaaggacacacatccactgtgtggagtttgtgt
tttgatgcagctggaaagcggctggcctcctgcagcgacgattgcactgtgaaaatttgg
aaggaatattcaagcgagaacacacaggattcatcttggaaatgtgtttgcacactgtct
gggtatcacggacggacagtgtatcatgttgactggtgtagcttaactggtgccctcgct
actgcttgtggtgacgacgctgtgcgagtatttaaggaggaaaataccagcgatcctgac
cagccggtatttttcctggctgctcaggtaaccaaagctcatagtcaggatgtaaactgt
gtcgcctggaacccaaaggaagcaggactcctggcctcttgcagtgatgatggagagatt
gccatctggcagttg

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