KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00007700G001
Entry
GSTEN00007700G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:tng00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tng03019]
    GSTEN00007700G001
   04121 Ubiquitin system [BR:tng04121]
    GSTEN00007700G001
Enzymes [BR:tng01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     GSTEN00007700G001
Messenger RNA biogenesis [BR:tng03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     GSTEN00007700G001
Ubiquitin system [BR:tng04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    GSTEN00007700G001
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 zf-RING_2 KH-I_KHDC4-BBP KH_KHD4_2nd RING_XB3-XBAT31 zf-C3HC4 Prok-RING_4 KH_2
Other DBs
NCBI-ProteinID: CAF92487
UniProt: Q4T3P5
LinkDB
Position
undetermined
AA seq 384 aa
GCKIKALRAKTNTYIKTPVRGEEPVFLITGRKEDVALARREIISAAEHFSMLRASRNKLG
MSFSGSPPTPLPGQTTIQVRVPYRVVGLVVGPKGSTIKRIQQQTCTYIVTPSRDRDPVFE
ITGSPSNAERAREEIEAHIAFRTGGLHDLNNENDCLGPSGGGSPVGSSSGLDSRLQQVWG
LQGAQRKPLTSSYRQNFSDAMIGGGSGGGSEGGGIYNKSNCSGSGEKPCSYFGSESAQGW
GDSDYPKQVAFYAQQRSKSFGGLPLPLTRLSPGLSEPCGGGSTNNSTVTSIVPIASSPHA
QARRAHSEPTSAGESFPGRLPVPDSPPVTVRDCMTCFESKVTAALVPCGHNLFCMECAIR
ICELNHPECPVCHTQVTQAIRIFS
NT seq 1152 nt   +upstreamnt  +downstreamnt
ggttgcaagatcaaagccttgagggccaaaaccaacacttatattaaaacgcctgttaga
ggagaggagccggtgtttttaattacaggtcgtaaagaagatgttgcattggctcgtcgt
gaaatcatctccgctgcagagcacttctctatgctccgggcctcccgcaacaaactgggc
atgtcgttcagtggctcaccacctacacctttgccaggtcagacgactattcaggttaga
gtgccataccgcgttgtgggattggttgtgggccctaaaggatccaccatcaaacgcatc
cagcagcagacttgcacttatatagttactccaagccgagacagagaccctgtttttgaa
attactgggtcaccgagcaatgctgagcgcgcacgtgaggaaattgaagcacacattgcc
ttccgaacaggaggcctgcatgacctcaacaatgagaacgactgcctgggcccaagtggt
ggaggtagcccagtgggcagcagtagtggtctagatagccgattacagcaggtgtggggg
ctgcagggggcccagcgcaagcctctcaccagtagctatcgccaaaatttctcagatgcc
atgattggaggggggagtggtggaggaagtgaaggagggggaatctacaacaaaagcaac
tgctctggttctggagaaaaaccttgctcttattttggatcagagagtgctcaaggttgg
ggggactccgactaccccaaacaggtggccttttacgcccaacaacgttccaagagcttt
ggaggcctcccacttcccttgaccagactctctccaggattgtctgaaccatgtggaggc
ggaagcaccaacaattctacagtcaccagcattgtgcccatagccagctcacctcacgcc
caggcccgccgtgcccacagcgaacccacctcggctggtgaaagtttcccagggcgtctg
ccggtgccagactcgccaccggtcactgtgcgagactgcatgacctgctttgaaagtaaa
gtaacggctgctttggtgccgtgtggccataacctcttctgcatggagtgtgccatccga
atctgtgagctcaaccacccagaatgcccagtatgccacacgcaggtcacacaggcaatt
cgaatattctct

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