Tetraodon nigroviridis (spotted green pufferfish): GSTEN00008288G001
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Entry
GSTEN00008288G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00008288G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
GSTEN00008288G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR5
Beta-prop_EML_2
WD40_Prp19
Beta-prop_HPS5
Beta-prop_EML
DUF3146
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-ProteinID:
CAF92870
LinkDB
All DBs
Position
undetermined
AA seq
694 aa
AA seq
DB search
GFTMELAYVCEWDKRSKSTHCPSIPLVCSWSCRNLVAFTTDLKNNNEDKDISHMIHIIDT
EHPWDVYCISSGHTEVISCLEWDQSGSRLLSADGDGQIKCWSMSEHLVNSWENILLSSVD
GDPIVALTWLHNGVKLALHVEMVTLRERQSGSTNFGEKFSRVKFSPSLTLFGGKPMEGWL
AVTVSGLVTVSLLKPGGALLTASESLCRLRGRVALADIAFTGGGNIVVAASDGSSSSPVQ
FYKVVVSVVNEKCRIDTELLPSLFLRCTTDPLRRDKYPAVTHLKFLTRENSEQVLLCASN
QNGSIVECWSLRKEGLPVNNIFQHRSPVVGEKQPTILKWRILTTTSDLERVSAVALPKLP
ISISNTDLKVASDTKFCPGLAALDMPAAQRRASKDRRGLEDQDRSDPACVGPVFVVADPS
WQGRGLALAFNDGSIQILHRLSLHTMGVFYGSSTASNAQRPGEESAIKRQRTGSPTVHFK
ALQFSWTSLALVGIDNHGKVTLAVCICFQLYMLRVSPSMGQVLEMNTTLRHLLFLLEYCM
VTGYDWWDVLLHVQPTMVHNLVEKLHEEYMRQNLALQQVLATRILAVKASLCKLSTATAA
RACDFYAKLLLIAISSTLKSLLRPHVLNTPDKSPGDRLTEICAKNTDTEIDKVMINLKTE
EFVLDGPPLQSLQQLIQWVGDFVLYLLANLPNQV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
ggtttcaccatggagctggcatatgtgtgtgagtgggacaaacgttcaaagagtacacac
tgtccatccatcccactcgtctgctcctggtcctgcaggaatttggtggccttcaccaca
gacctgaagaacaataatgaagacaaggacattagtcacatgatccacatcattgacacg
gagcacccctgggacgtttactgcatcagttctggacacaccgaggtcatttcttgtctg
gagtgggatcagtccggatcgcggctgctgtcagcagacggtgatggtcagattaaatgt
tggtccatgtcggagcacctggtgaacagctgggagaacattctcctgagttctgtggac
ggggatccgattgttgccttgacctggttgcacaatggcgtgaagcttgctctgcacgtg
gagatggtaacgctgagggagcgccagtccggctctacaaactttggggagaagttctcc
cgggtcaaattctcaccgtctttgactttgtttggcgggaagcccatggagggctggctg
gccgtgacggtgagcggtttggtaaccgtgtcgctgctgaaacccggaggcgctctgctg
acggccagcgagagtctgtgccggttgcgaggacgtgtggccttagctgacatcgccttc
acgggaggagggaacatcgtggtggcagcatcagatggcagcagctcgtccccagtccag
ttctacaaggtggtcgtaagtgtggtaaacgagaaatgccgcatcgacacagagctgctg
ccgtctctgttcctgcgctgcaccaccgaccccctgagaagagacaagtaccccgccgtg
acccacctcaagttcctcaccagagagaactcggagcaggtccttttgtgtgcgtccaat
cagaacggcagcatcgtggagtgctggtctctcagaaaggaaggcctccctgtaaacaac
atcttccagcaccgctccccagtggttggagagaagcagccgacaatcctgaagtggagg
atcctaaccaccaccagtgatctggaacgagtctcagccgtagctctgcccaaactaccc
atctccatctccaacacggacctgaaggtggcgtcggacaccaagttctgccctggactt
gctgccctggacatgcctgcagctcagcgcagggctagcaaagacagacggggccttgag
gaccaggaccggtctgacccagcttgtgtcgggccagtgtttgtagtggctgatcccagc
tggcagggtcgggggcttgctctggcctttaacgatgggagcattcagatccttcaccgg
ctctctctgcacaccatgggcgtcttttatggctcctccactgcctcgaacgctcagaga
cctggggaggagtctgccatcaaacggcagagaacagggagtcccaccgtccacttcaag
gccctgcagttctcctggacctccctggctctggttgggattgacaaccacggcaaggtg
acgcttgcggtctgcatttgcttccagctctacatgctacgagtgtcgccgtctatgggc
caggtgctggaaatgaacactacgttgcgccatctgttgtttctgctggagtactgcatg
gtgaccggttacgactggtgggacgtcctgctgcatgtgcagcccaccatggtgcacaat
ctggtggagaagctgcatgaggagtacatgaggcagaacctggcgctgcagcaggttctg
gccacgcggattctggctgtgaaggcttctctgtgtaagctgtccacggcaacagcagct
cgagcctgtgacttctacgccaaactgctgctcatcgccatcagctccacgctgaagtcc
ctgctgagaccacatgtcctcaacacacctgacaagagtccaggggaccgactgactgag
atctgcgccaagaacacggacacagaaatcgataaggtgatgatcaatctgaagaccgag
gagtttgtgctggacgggcccccgctccagtccctgcagcagctgatccagtgggtggga
gactttgtcctgtacctgctggccaacctgcccaaccaggtg
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