Tetraodon nigroviridis (spotted green pufferfish): GSTEN00008680G001
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Entry
GSTEN00008680G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00008680G001
Spliceosome [BR:
tng03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
GSTEN00008680G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
DZF_N
DZF_C
Dicer_dsRBD
MAM33
Motif
Other DBs
NCBI-ProteinID:
CAF93170
UniProt:
Q4T1R2
LinkDB
All DBs
Position
undetermined
AA seq
673 aa
AA seq
DB search
HSSIYPSSQELEAVQALVSTVERALKHVSDWLDESSGHTHSSFGSQPESSTEEDDPGEEE
QAEDGREAGGGGGVLCGVMRIGLVAKGLLIKGDMDLDLVLLCRDKPTQTLLDTVCHRLPT
QIQKLTEEKYEVSSSSAEAAILVRTTAEPKLTLKVTLTSPAMREEEEEEEEEEEEEEEGL
GEVLDRHTCLLALAALRHAKWFQARVNGLKSCVIVLRILRDMCNRHAAWEPLQGWPLELI
CEKAIATCNRPLGAGASPAAGHGVFGLGHSAARLMAFGQICKVLEMEPLPQSKQPQRFPW
ADKEGLGLKRPYEDGAMDDKDLIKKMKRNLRKVLDSKAIDSNQPMNALMRLNQIRPGLQY
RLLSQSGPVHAPVFTMSVDVDGTVYEASGSSKKTAKLHVAVKVLQAMGYPTGFDSDLDPM
SSDEKSDGESKSETSSHTSNNPTHPDSPNTLEVRTQGPILTASGKNPVMELNEKRRGLKY
DLISESGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAAANKKKK
ILPQTKGALAAAAAAAAASAVAAQVARGRGRAAWREEPSSARRLPVTSRQASGRRTATVR
LLRPLLLTVCVARFEGEFEALPLSLVPINPPPPLKPLFPLSAGGLFIDNPFYQPRTIAPF
IIHLGPQDLFSDF
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
cactcctccatctacccgtcctcccaggagctggaggccgttcaggcgctggtgtccacc
gtggagcgcgccctcaaacacgtctccgattggctggacgagagcagcggccacacccac
agctccttcggcagccaaccggagagcagcacagaggaggacgaccctggcgaggaagag
caagcggaggacggcagagaggccggcggcggcggcggcgtgctctgtggcgtgatgagg
atcggcctggtggccaaaggcctcctgatcaaaggggacatggacctggacctggtgctg
ctgtgcagagacaaacccacacagacactgctggacactgtctgccaccggctgcccaca
cagatccagaaactgacggaggagaagtacgaggtcagcagctcctcggcggaggcggcc
atcttggtgaggacgacggcggagcccaaactcaccctgaaagtcaccctcacctccccg
gccatgagggaagaagaggaggaggaagaggaggaggaggaagaggaggaagaggggctg
ggggaggtgctggatagacacacgtgtctgttggccctggctgcgctgcgacacgccaag
tggttccaggctcgcgtgaacgggctcaagtcctgcgttatcgttctcaggatcctcaga
gacatgtgtaaccgacacgccgcctgggagcctctgcagggatggcctttggagctcatc
tgtgagaaggccatcgccacctgcaaccggcccctgggggccggagcaagccctgcggcg
ggtcatggagtgtttggcctcgggcattctgctgcaaggctgatggcgttcgggcagatc
tgcaaggtgctggagatggagccgctgccccagagcaagcagccccagaggttcccctgg
gcggataaagaaggcctgggtctgaagcggccgtacgaggatggagcgatggacgacaag
gatctcatcaagaagatgaagaggaacctaaggaaagttctggacagtaaagccatagac
tccaaccagccaatgaacgccctgatgcggctgaaccagatccgaccggggctgcagtac
cgcctgctctcccagtccggcccggtccacgctccggtcttcaccatgtctgtggacgtg
gacggaaccgtctacgaagcgtccggatcgtccaagaagacggcgaagctccacgtggcc
gtcaaggtcctccaggccatgggctaccccacaggcttcgactccgatctggaccccatg
agctcggacgagaagtcggacggcgagagcaagagcgagacgtcgtcgcacacgagcaat
aacccaacacacccagacagtcccaacacgctggaggtacgaactcagggtcccatactg
acggcgagcgggaagaaccctgtcatggagctcaacgagaagaggcgtggcctcaagtac
gacctcatctccgagagcggagggagccacgacaagcgcttcgtcatggaggtggaggtc
gacgggcagaagtttcgtggggcgggccccaataaaaaggtagcaaaagccagcgccgcc
ctggccgctctggaaaaactcttctctgggcccaacgcggcggctaacaagaagaagaag
atcttgcctcagactaaaggagccctagctgccgccgccgccgccgccgccgcctctgct
gtagcagctcaggtagcccggggacgaggacgagcggcgtggcgcgaggagccttcgtca
gcgcggcggctcccggttacgtcacgccaggcttcgggacgccgtacggctacagtccgg
ctgctgcggccgctcctgctaacggtttgtgttgcacgttttgaaggtgagtttgaagcg
ttaccgttgtccctcgtgcccatcaaccctcccccacccctgaagcccctctttcctctc
tccgcaggggggctcttcatcgacaatcccttctaccagccgcggaccatcgctcccttc
atcatccatctgggtccccaggacctcttctccgacttctag
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