Tetraodon nigroviridis (spotted green pufferfish): GSTEN00009146G001
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Entry
GSTEN00009146G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03082
ATP-dependent chromatin remodeling
tng03083
Polycomb repressive complex
tng04110
Cell cycle
tng04330
Notch signaling pathway
tng04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GSTEN00009146G001
03083 Polycomb repressive complex
GSTEN00009146G001
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
GSTEN00009146G001
04350 TGF-beta signaling pathway
GSTEN00009146G001
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
GSTEN00009146G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00009146G001
Enzymes [BR:
tng01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
GSTEN00009146G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
GSTEN00009146G001
HDAC complexes
Sin3A-HDAC complex
GSTEN00009146G001
BRAF-HDAC complex
GSTEN00009146G001
REST complex
GSTEN00009146G001
SHIP complex
GSTEN00009146G001
MiDAC complex
GSTEN00009146G001
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
GSTEN00009146G001
Heterochromatin formation proteins
Other heterochromatin formation proteins
GSTEN00009146G001
Chromatin remodeling factors
NuRD complex
GSTEN00009146G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-ProteinID:
CAF93492
UniProt:
Q4T0U0
LinkDB
All DBs
Position
undetermined
AA seq
490 aa
AA seq
DB search
MAYTTATGTKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATAEEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYE
HIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYMKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKAAHSVHRNMTNQNTQE
YMDKIKQRLFENLRMLPHAPGVQMQAIPEDAVPDDNVDEDTEDPDKRLSIRATDKRIACD
EEFSDSEDEGEGGRKNVANHKKGAKRPRVDEDKKDGEEKKIEIKEEENTKDISAEKTDSK
SVKTEQTTSA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcttacacgactgcgactggtaccaagaagaaggtctgctactactatgacggtgac
ataggaaattattattacggacaaggacatcccatgaaaccacatcgcatccggatgacc
cacaatctgcttctgaactatggactatacagaaaaatggaaatctacagaccacacaaa
gccacagcagaggagatgaccaagtatcacagtgacgactacattaagtttctgcgatcc
atacgaccggacaatatgtctgagttcagcaagcagatgcagcgcttcaacgttggagag
gactgtcctgtgttcgacggcttgtttgaattctgccaactttccgctggaggatctgct
gctggttcagtgaagttgaacagacaacagacggacattgcagtcaactgggccggagga
cttcaccatgcgaagaagtcggaggcttccggcttctgctacgtcaacgatattgttctg
gccatcttggagctgctcaagtaccatcagagggtgctgtacatcgacatagacatccac
catggagatggtgtggaggaagcgttctacaccactgacagggtcatgactgtgtccttc
cataaatatggggagtattttcccggaactggagatctcagggatattggggcaggaaag
ggcaaatattatgctgtcaacttccccctgcgtgacggcatagatgacgagtcatatgag
cacatctttaaacccgtgatggcaaaagtgatggaaatgtaccagcccagtgccgtggtt
cttcagtgcggcgccgactcgctgtcaggagaccgtctgggctgctttaacctcaccatt
cgtggccatgcaaagtgtgtggagtacatgaagtccttcaacctcccgctgctcatgctg
ggcggaggaggatacaccatccgcaacgtggctcgatgctggacctatgagacggccgtc
gccctggacactgacattccagacgagcttccatacaatgattattttgaatactttgga
cctgacttcaaagctgcacattcagtccatcgaaacatgaccaatcagaacactcaggag
tacatggacaagatcaaacagcggctctttgagaacctgaggatgctgcctcatgctcca
ggggtgcagatgcaggccattcctgaagacgctgtacctgacgacaatgtggacgaggac
accgaagatcctgacaaacgcttgtccatccgtgccacagataagaggatagcctgtgat
gaagagttttcagactcggaggatgaaggcgagggtgggagaaaaaacgtggccaaccat
aagaagggtgcaaaaagacccagagttgatgaagacaagaaggatggtgaggagaagaaa
atagaaattaaagaggaagagaacacgaaggacatcagtgcagagaagacggactctaaa
agtgtgaagactgagcagaccaccagtgcctga
DBGET
integrated database retrieval system
