Tetraodon nigroviridis (spotted green pufferfish): GSTEN00009290G001
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Entry
GSTEN00009290G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13091
RNA-binding protein 23/39
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00009290G001
Spliceosome [BR:
tng03041
]
Common components
Common spliceosomal components
General mRNP proteins
GSTEN00009290G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RBD_DEAH11
RRM_7
RRM_8
Motif
Other DBs
NCBI-ProteinID:
CAF93583
UniProt:
Q4T0J9
LinkDB
All DBs
Position
11
AA seq
500 aa
AA seq
DB search
MADDLDIEAMLEAPYRKTCLTISHLYSPESHCDLSQTQRRRPSSRAPTSRRRKKRSRSHE
RKHSRSRERKKSCSRERKRSRSRDRRRSRSRERRSSRERGGRHREHHKHHRRSRSQSPAR
KEKSPVRREKSPVSWLPGLRPRDLEDFFSAVGKVRDVRMISDRSSRRSKGIAYIEFVEAS
SVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAAAAAANNLQKGMMGPLRLYVGSLHF
NITEEMLRGIFEPFGRIENIQLMVDSDTGRSKGYGFITFADAECAKKALEQLNGFELAGR
PMKVGHVTDRSDAVAPPFPDGEEQERAGADLGSTGRLQLMAQLSEGTGLPMPPSAQQALQ
MSGAIALGAMAAVSAAMNPGLNMSIPSQPLATHCFQLSNMFSPNSELPPGWELDIQHNVI
EECNKHGGVVHIYVDKDSAEGNVYIKCPTIPAAMAAVNVLHGRFFNGKLITAAYVPLPTY
HNLFPEAATANQLLLPPARR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgacctggacattgaggcgatgctggaggctccttacaggaagacttgccta
acgatttctcacctctactcccctgaaagccactgtgatctgtcacaaacacaaaggagg
aggccaagctccagagccccgacatccaggaggaggaaaaaacggagccgctctcacgag
aggaagcacagccgcagccgagagaggaagaagagctgcagccgagagaggaagaggagc
cgcagccgcgacaggcggaggagtcgcagcagagagaggcgcagcagcagagagaggggc
gggaggcacagggagcaccacaaacaccatcggcggtcgaggagtcagagtccagcgagg
aaggagaaaagtcccgtgaggagagagaagagtccagtcagctggctgccaggacttcgg
cccagagacctggaggacttcttctctgctgtggggaaggtgcgtgacgtcaggatgatc
tccgacagaagctcccgcaggtccaagggcattgcctacatcgagtttgtggaggccagc
tcggttcctctggccatcggcctgacggggcaacgcctgctgggggttcccatcatagtt
caggcctcgcaggcggagaagaaccgggcggcggcggccgcggcggcggcggcagcagcc
aacaacctgcagaaaggaatgatggggccgctgaggctctacgtgggctccctgcacttc
aacatcacagaggagatgctgaggggcatctttgaaccctttggacggattgagaacatc
cagttaatggtggacagcgacacgggtcgctccaaaggctacggcttcatcacttttgca
gatgcagaatgtgccaagaaagcgctggagcagctgaacggcttcgagctggcgggccgc
cccatgaaggtgggccatgtgacggaccggagcgacgccgtggctccgcctttccctgac
ggcgaggagcaggagcgcgccggcgccgaccttggaagcactggcagactccagctgatg
gcgcagctctctgagggtacgggccttccgatgcctccttccgctcagcaggctctgcag
atgagtggagccattgctctcggcgcaatggcggcagtttcagccgccatgaatccaggt
ctcaacatgagcattccatcccagcctctggccacacactgctttcagctgtccaacatg
ttcagccccaacagtgagctgcctcctggctgggagctggacatccagcacaacgtcata
gaggagtgtaacaagcacggaggagtggttcacatctacgtggacaaggattctgcggag
gggaacgtctatatcaagtgtcccacgatccccgctgccatggctgccgtcaacgtgctg
catggacgcttcttcaacggtaagctgatcacagcggcctacgttcctctgcccacctac
cacaacctgttcccggaggccgccaccgccaaccagctgctgcttccaccggcgagacgg
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