Tetraodon nigroviridis (spotted green pufferfish): GSTEN00009399G001
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Entry
GSTEN00009399G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13190
RNA-binding protein 15
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00009399G001
03041 Spliceosome [BR:
tng03041
]
GSTEN00009399G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
GSTEN00009399G001
Spliceosome [BR:
tng03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
GSTEN00009399G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-ProteinID:
CAF93650
UniProt:
Q4T0D2
LinkDB
All DBs
Position
undetermined
AA seq
602 aa
AA seq
DB search
AAAELPAARPGTLEYKTLLVSNLGSQVSDEDVEDALIHEFKKFGDVSVKLSHTPELGRIA
YVNFRHPEDAKEARHAKSSRLLLGERPLKVEPMYVRRRSVTPPEVGYVPLHASYAYRQRS
LSPPGPGLANLRDLRARQYALETLGLSRERERLLDYYGMLDERGRPYGFPPMPVVEDLKP
EDDQRATSNLFIGNLDGNVTEAELRRGFDKYGIIEDVVIKRPARGQGGAYAFVKFQNLDM
AHRAKVAMQGRLIGGNPIKIGYGKANPTTRLWVGGLGPGNSLAALAREFDRFGSIRNIDY
VKGDSFAYIQYESLDAAQAACTQMRGFPLGGPGAPAPGGLRQGGGEPVPALPAWLPAARG
AAGPLRAAGRGLRPPPQPGAGGQHAGRVRPGLAVQDVARLLRPEEQQLPHRALPAGGRSF
LFRRRHARQPEGAEPAEDRAACAWTRAAWTRCRAASSWGSPTTSPSCWRCRAPWSARPAR
RRVAAGAPAAPPGHVPAQQGGGGRGHPAGGQGGRARRHAVRLPPRGVLPSVPAGGAWGAG
PPGGRAHGRRHRQRQQLTPLRAGATPPPPPRAAVGPSLGPATRTGVRRRGNASWTRDPPF
LR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gcggcggcggagctgcccgccgccaggccgggcacgctggagtacaagaccctgctggtc
agcaacctgggctcgcaggtgtccgacgaggacgtggaggacgcgctgatccacgagttc
aagaagttcggggacgtcagcgtgaagctgtcccacacgcccgagctgggtcgcatcgcc
tacgtcaacttccgccaccccgaggacgccaaggaggcccgccacgccaagtcgtcccgg
ctgctcctgggggagcggccgctcaaggtggagcccatgtacgtgcggcggcgcagcgtg
accccgccggaggtgggctacgtgccgctgcacgcctcctacgcctaccgacagcggtcc
ctgtccccgcccggacccgggctggccaacctcagggacctccgagcccggcagtacgcc
ctggagaccctgggcctgagccgcgagcgggagcggctcctggactattatgggatgctg
gacgagcggggccggccctacggcttcccgcccatgccggtggtggaggacctgaagccc
gaggacgaccagcgggccaccagcaacctgttcatcggcaacctggacggcaacgtgacg
gaggcggagctgaggcggggcttcgacaagtacggcatcatcgaggacgtggtgatcaag
cggcccgcccgcggccagggcggggcctacgccttcgtcaagttccagaacctggacatg
gcccaccgggccaaggtggccatgcagggccgcctcatcggcggcaaccccatcaagatc
ggctacggcaaggccaaccccaccacgcgcctgtgggtggggggcctggggcccggcaac
tcgctggccgcgctggcgcgggagttcgaccgcttcggcagcatccgcaacatcgactac
gtgaagggcgacagcttcgcctacatccagtacgagagtctggacgccgcccaggccgcc
tgcacgcagatgaggggcttccccctgggggggccaggagcgccggctccgggtggactt
cgccaaggtggaggagagcccgtcccggcccttcccgcctggttaccagccgcccgtggc
gccgctggcccactacgagctgctgggcgaggccttcggccgccaccgcagcctggagcg
ggaggccagcacgctggccgagttcgcccgggcctcgctgtccaggatgtggcacggctt
cttcgccctgaagaacagcagcttccccaccgagctcttcctgctggagggcggagcttc
ctttttcggcgccgccatgcgcgacaacctgaaggcgccgagccagctgaagatcgcgca
gcctgcgcatggaccagagccgcctggacgaggtgtcgcgccgcatcaagctggggaagc
ccgacaacttcgccatcctgctggcggtgcagggcgccgtggagcgccaggccagcgcgc
cggagggtggctgcaggtgcgcctgctgcgccacctggtcacgtacctgcgcaacaagga
ggcggcgggcgtggtcatcctgccggcggccaaggagggcgggcccggcgccatgctgta
cgccttcccccccggggagttctcccatcagtacctgcaggcggcgcatggggcgctggg
ccgcctggaggacgagcacatggtcgtcgtcatcgtcagcgacaacaactgacgccgctc
cgggccggagccacgcctcctcctcctcctcgggctgcggttggaccgtccctcggtcct
gccacccggaccggcgtcaggcgccgcgggaacgcctcctggacacgtgaccctcctttt
ctacgctaa
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