Tetraodon nigroviridis (spotted green pufferfish): GSTEN00009464G001
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Entry
GSTEN00009464G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00009464G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tng04091
]
GSTEN00009464G001
Lectins [BR:
tng04091
]
C-Type lectins
Lecticans
GSTEN00009464G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-ProteinID:
CAF93697
UniProt:
Q4T085
LinkDB
All DBs
Position
undetermined
AA seq
1594 aa
AA seq
DB search
MAPPTCLWTLVPAVLLGLSSSQASLLKVNKGLKVKRGQAAFLQEDHLQFRVPPQRDACKV
EVLQNQPVSQRVGKLLPQVFDCHFRSDEVKYVHNGCPLLLEDTVLLRLYRFTETETHTEV
FSIHVDIVQPDCGLIKLGPKSLKVPEVYGLSDALDANVVSFHYERRSSLQCSVLLSRQDT
HFPAHGQLVTGEPQEATKRGDEPESLVPLRQQLDNQARARCRSEDCLKGLKLARFSKVPC
DQFLMMGLRYQHTDPPSPDKDYVTIKLELRDLRSGGVYRVAGCSSAAVTSLIPCAHQQLC
LLQSEQAWIPVQIGGALPNQPPKASFMSMLILEVDQFILTPLSTATVDAEDEETPQQLLV
FNITKPPADGFMAHLSDHTQPVSSFTWLDLNDMLVAYQPPNSSHSQRRNCEVELEVHDLF
FERSPPVTVHMSVRSADTNAPRVSWNMGERSFKRPPLGRGRRRFCIFLSWSPRSEPAGGS
VPADNVGAAANRGQRQPGRRPSRSRGRSSARTSHHQRGKGLRVHGQRRQGGRGPLSPRRQ
RHHQGLRGLPHQRRPASDPTQVPHQGSAQGRQPPVPDDQHAAGGVRGPDGAAGSLHPSGL
RHGLQRRLHPLQRHPRPAGWPDPESPGTWSHRSALALPRRHHLFGPSDPCRLAPGYPVSQ
FLQRDLFRSTIYYRHLGNEVFDDSFEVVLSDVHEPPNFSEPQVGDGSNPGGLYLQGSSHF
GPRWRSGVQVVTVHIQPVPDQPPKEAPGSSRCLVVKETDVVLITRDQLQFVDEESPDSEL
IYTVTSPPFYRDPHGRSSDAGRLFLVDSIPKFTKDPAAPVLRLFTQHAVNFLKVAYMPPA
VDIGPNPQHVGLVLSVTNHQGRSVTGICFNITVMPVDNQPPQVPPDPCDQLAEGGGVESV
SQTSCWCLVPGGGRCVDGGRGRRESRWLPEPAALRRGLQRRSPAGASPGGSAARGPEDRQ
RESHQRRGPGAGSRSETRPQVSRGTGDAHHHRIPLRHGCRLSRRQPALPGRSATPSRRGA
LQRPRRGPLRPGRGDCRDRLLQTHRSGGRAHTLPRHCHHRGLGRRSRRWRELGGTQGQSA
GLRLTRHRPSGGQSAAISHSRQVCTPDLSRRCFATAPNFSPPGHLTLWSLGEIFSVDEGG
VAPITTSHLRASDEDTPLDQLVVSLIHPPQFGYIENVLPSPGFEKSNTGISIGKDIVDGH
VNYVQSRHQRVEPTADQFKLCVSDGGRASAHLPFHVVIKATNDEIPEFVAHNITANGAGS
HGCLCEQVEEGDRKQLDLSVLRALDLDVPEDELRFSLFRAPRHGSIIRGADRRNSTGTPG
GGRPSRPGTGRPRRPEPVLDFTLQDLQNGMDVTYVHDDSDTTEDSFVLRLTDGRHELDRE
VAVRVVPVNDQEPRLVRLAPETNSGVEVEPGEARLISSAALLAQDADTPATEVRYRIQSV
PTQGLLQLKESRDWVTLEAGADCSQEQVSMNRLRYLHMGADGAKAQDFFVFRLLDGQNQS
PPQHFHISVKELEKGSISVFVKPAKVSRGDRVTLTTDVLLATDGSGKPEELLYVVTGPPS
HGHLEYVAHPGAAISAFSQLDVAANQVAYAHDNR
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccccaacctgtctctggaccctggtcccggcggtcctgctgggactgagctca
tcgcaggcgtccctcctgaaggtcaacaagggtctgaaggtcaaacgaggccaggcggcg
ttcctgcaggaggaccacctgcagttccgggtccccccccagagggacgcctgcaaggtg
gaggtgctgcagaaccagcccgtcagccagagggtcggcaagctcctgccccaggtgttc
gactgtcacttccggtctgatgaggtcaaatatgtccacaatggctgtccactgttgctg
gaggacaccgtccttctcagactgtacaggttcacggagacggagacacacacggaagtc
ttctccatccacgtggacatcgtccagccagactgtggcctcatcaagctgggccccaag
tccctgaaggtccctgaggtctacggtctctccgacgccctcgacgccaacgtggtgtcg
ttccactacgagaggagatccagtctccagtgcagcgtcctcctcagccgccaggacacc
cacttcccagcccatggacaactggtcaccggagagccgcaggaagctaccaagagaggg
gacgagccggagagcttggtccctctgcgtcagcagctagataaccaagcccgcgccagg
tgcagatcggaggactgcctgaagggcctgaagctcgccaggttctccaaggtcccctgc
gatcagttcctgatgatgggcctgcggtaccaacacacggaccctccgtctccagacaag
gactacgtgaccatcaagctggagctgagggacctacgcagcggcggcgtttaccgggta
gctggctgctccagcgccgcggtcacctccctgatcccctgcgcccatcaacagctttgt
cttctccagtctgaacaggcgtggatcccggtccagatcggcggggccctgcccaaccag
cctcccaaagcatccttcatgtccatgctcatcctggaggtggaccagttcatcctcacg
ccgctctccacggcgacggtggacgccgaggatgaggagactccccagcagctcctggtc
ttcaacatcaccaaaccccccgccgatggcttcatggctcacctctccgaccacacgcaa
cccgtctcctccttcacctggctggacctcaacgacatgctggtggcctaccaacccccc
aactcatcgcatagccagcggcggaactgcgaggtggagttggaggttcacgacctcttc
tttgagaggagcccgccggtaacggttcacatgtcggtgaggagcgccgacaccaacgcg
ccgcgggtctcctggaatatgggtgagcgcagtttcaaacggcccccccttgggcgtgga
cgaagaaggttctgcatcttcctgtcctggtcccccaggtctgagcctgctggagggtca
gtcccggccgataacgtgggagcagctgcaaatcgtggacaacgacaacctggacgccgt
ccgtctcgtagtcgtggacggtcttcagcacggacgtctcaccatcagaggggcaaaggg
cttcgtgttcacggtcagcgacgtcaaggcgggcgtggtccgctatcaccacgacgacag
cgacaccaccaaggactacgtggtcttccgcatcagcgacggccagcatcagacccgaca
caagttccccatcaaggttctgcccaaggacgacagccccccgttcctgacgaccaacat
gctgctggaggtgtccgagggccagacggtgctgctgggagcctccacccttcaggcctc
agacatggactccagcgacgactacatcctctacaacgtcacccgcgccccgcgggctgg
ccagatcctgaaagtcccgggacctggagtcacaggtcagcactcgctcttccccggcgg
caccatcttttcggcccttctgacccttgccggttggctccaggttacccggtcagccag
ttcctgcagagggacctgttccgctccaccatctactaccgccacctcggcaacgaagtc
tttgacgactccttcgaagtggtgctctcggacgtccacgagccgcccaacttctccgag
ccacaggtgggtgacggctccaaccccggcgggctctacctccaaggatcctctcatttt
ggtccacgctggcgctctggtgtgcaggtggtgacggtgcacatccaacctgttcctgac
cagccccccaaagaagctcccggctccagccgctgcctggtcgtcaaggaaacagacgtg
gtcctcatcacacgggaccagctccagtttgtagatgaggagtcgccggacagtgagctg
atctacaccgtcaccagcccgccattctaccgtgaccctcatggccgcagctccgatgcc
ggacggctgtttctggtcgatagcatcccaaaattcaccaaagacccggcggcgcctgtg
ctgaggctattcacacagcatgcagtcaacttcctgaaggtggcctacatgccccctgcg
gtggacatcggtcccaaccctcagcacgtcgggctggtcctgtccgtcaccaaccaccag
ggcagatctgtgactgggatctgcttcaacatcaccgtgatgcccgtggacaaccagcca
ccacaggtgccaccggatccctgtgatcagcttgcggagggaggaggagtggagtcagtg
tcacagacctcctgctggtgtcttgttccaggtggtggccggtgtgttgatggtggacga
gggaggagagagtcccgttggctcccagaacctgctgctctcagacgtggactccagaga
agaagccctgcaggtgcatctccaggcggctccgcggcacggggccctgaggatcggcaa
cgtgaatcccatcaacgacgaggtcccggtgctggctccaggtctgaaacccgtcctcag
gtgtccagagggacaggagacgctcatcaccacagaattcctctgcgccacggatgccga
ctcagccgacggcagcctgctcttcctggtcgctcggcaaccccgtcacggcgtggtgct
ctgcagaggccgcgtcgtggaccgcttcgtccaggccgaggtgactgcagggaccgtctc
ctacagacacaccggtcgggaggtcgggctcacaccctgccacgacactgtcaccatcgt
ggtctcggacgaaggagcagaaggtggagggagctgggcggaacccagggacagtctgcc
ggtctacgacttacgcgtcaccgtccttccggtggacaatcagccgccatctctcacagc
aggcaagtttgtacgccggacctgtcgaggcgatgtttcgctacggcgcccaactttagc
ccccctggacacctgactttgtggtctttaggcgaaatcttcagcgtcgacgagggcggc
gtcgctcccataaccacgtcccatctgagggcgtccgatgaggacacccccctggaccag
ctggtggtcagcctgatccacccgccccagttcggctacatcgagaacgtccttcccagc
cccggtttcgagaagagcaacacaggcattagcatcggcaaggacattgtggacggccat
gtgaactacgtccaatcccgccaccagagggtggagcccacagccgaccagttcaagctg
tgcgtgtcggacggtgggcgcgcctccgcccaccttccctttcatgtcgtcatcaaagca
acaaacgacgagatcccagagtttgtggctcacaacatcacggcaaacggagctggttct
catgggtgtctctgcgagcaggtggaggagggagacaggaagcagctggacctgtctgtc
ctgcgagccctggacctggacgtgcccgaggacgagctccgcttcagcctgttccgagct
ccgagacacggcagcatcatccgcggcgcggaccggcgaaactccaccgggacaccaggg
ggtgggcgtccaagccgtcccgggacgggccgtccaaggcgcccagaaccggtgctggac
tttaccctccaggatctgcaaaatgggatggacgtgacgtacgtgcacgacgactcggac
accacggaggacagctttgtcctgcgcttgaccgacggccggcacgagctggacagagag
gtggcggtcagagtggtgcccgtcaacgaccaggagccgcggctcgtgaggttagcgcct
gagacgaacagcggagtggaggtggagccaggagaagcccggctcatttccagcgctgcc
ctcctggcgcaggatgccgatacccccgccaccgaggtccggtaccggatccagagcgtt
cccacgcaaggactgctgcagctaaaggagtcccgggactgggtgacccttgaagcgggt
gctgactgcagccaggagcaggtcagcatgaaccgcctgcgctacctgcacatgggagca
gatggcgccaaagcccaggacttcttcgtcttccggttgttggatgggcagaaccagtca
cccccgcagcacttccacatctctgtcaaggagctggagaagggaagcatctccgtcttt
gtgaagcccgccaaggtcagccgtggggatcgggtgacgctcaccacggatgtgctgctg
gccacggacggcagcggcaaacccgaggagctcctctacgtggtcaccgggcctccctct
cacggacacctcgagtacgtggcgcatccgggggcggccatctctgccttcagccagctg
gacgtagcggccaaccaggtggcctacgcccacgacaaccgc
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