Tetraodon nigroviridis (spotted green pufferfish): GSTEN00009505G001
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Entry
GSTEN00009505G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tng03016
]
GSTEN00009505G001
Enzymes [BR:
tng01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GSTEN00009505G001
Transfer RNA biogenesis [BR:
tng03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GSTEN00009505G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
CYYR1
Motif
Other DBs
NCBI-ProteinID:
CAF93724
UniProt:
Q4T058
LinkDB
All DBs
Position
undetermined
AA seq
575 aa
AA seq
DB search
MLPLKEKDKPLVRKLLAAGCCARCVLRFCCVSVQAAYRPLRGTRLPGCFGPRGPGGAPSK
RAKLQLPEDPGAPGEAAAGAESRVCVACLGVLQEFCDVAQATKIAAAVRAEPYEFDSLVL
SVSLPAQLGVREVSLRLSLLREPEGLTWVSSAPAALLLAPREEGSEVKVFLMQKAGNGWF
LTWLVPQGQVPHAQQGRRGPGEGGLQVGHARPAGQGAGRRCRGYQGIHREASQLLGSHSA
SFSLSLLSQSLFEVGVEFSHPQTDADCHFLCVCVCVCVCVCVCLSQSVFTRMAVVKALDK
ISDLALLKHYPSPPAPVSSRCVLQDVQCLHTSLFIAGRYNKFSRNLPQTPWLIGGERRME
SSVEELIAAPILATFRTDGFNFSSSGREDVDVRTLGTGRPFAVELLNPHRSRVSRAEMRQ
LQEQTINASSDKIRVRDLQMVTREATSRMKEGEEEKTKSYTALVWTHKALQREDLSFIDD
IKDLTLNQKTPLRVLHRRALAVRQRLVHSMSARFVDPHHFYLGLKTQAGTYIKEFVHGDF
GRTKPNMCELLGTHTDILELDVESVDVDWPPTVSD
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctctgaaggagaaggacaaacctctggtccggaagctgctggcggcgggctgc
tgcgctcgctgcgtcctcaggttctgctgcgtcagcgtccaggctgcctaccggcccctc
cgagggacgcggctccccgggtgcttcgggcccagaggtccaggcggagcgccgagcaaa
cgggccaagctacagcttccagaggaccccggtgccccaggggaggctgctgccggcgcg
gagtcgcgcgtgtgcgtggcctgtctgggggtcctgcaggagttctgtgacgtcgcccag
gcgacaaagatagcagcagccgtcagggcggaaccgtacgagtttgacagcctggtgctg
tccgtgtctctgcccgctcagctgggggtccgagaggtcagtctgcgtttgagcctcctc
agagagcctgagggtctcacctgggtttcttctgcccctgcagcactcctgttggctcca
cgtgaagaaggaagtgaggtaaaggtgtttttgatgcaaaaagccgggaatgggtggttc
ctgacctggctcgtccctcagggacaagtgcctcacgctcaacaaggacgacgtggtcca
ggtgaaggaggccttcaagtgggtcatgcaaggcctgctggccaaggagctgggcggcgt
tgccgtggttaccaaggtatccaccgggaggccagccagctgctgggttctcattcagcc
tctttcagtctttctctcctgtcgcagagtttgttcgaggtcggcgtggagttcagccac
ccccagacggacgccgactgtcacttcctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtctctcacagtcggtgttcacacggatggcggtggtcaaagctttggacaag
atttccgatttggctcttttaaagcattacccgtcaccgccggcgcccgtgtccagccgc
tgtgtcctgcaggacgtccagtgtctccacacctcgctcttcatcgcaggcaggtacaac
aagttctcccggaacctccctcagacgccctggctgattggcggtgagcggaggatggag
tcgtcggtggaggagctgatcgccgctcccatcctggccaccttccgaaccgacggtttc
aacttctcctcgtccggccgggaggacgtggacgtgcggacgctggggaccggtcgtccc
ttcgccgtggagctgctgaaccctcacaggtccagggtcagccgagcggagatgaggcag
ctccaggagcagaccatcaacgcctcttcagacaaaatccgggtgcgagacctgcagatg
gtgaccagggaggccaccagccggatgaaggagggggaggaggagaagaccaagtcctac
acggcgctggtctggacccacaaggcccttcagagggaagacctgagcttcatcgacgac
atcaaagatctgaccctgaaccagaagacccccctgagggttctgcaccggcgggccctg
gcggtgcgtcagaggctggtccacagcatgagcgccaggttcgtggacccccaccacttc
tacctgggcctgaagacgcaggcggggacgtacatcaaggagtttgtccacggggacttt
ggacgcaccaaacccaacatgtgtgagctgctggggacccacacggacatcctggagctg
gacgtggagtcggtggacgtggactggcccccgaccgtcagcgactga
DBGET
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