Tetraodon nigroviridis (spotted green pufferfish): GSTEN00009869G001
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Entry
GSTEN00009869G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03022
Basal transcription factors
tng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSTEN00009869G001
09124 Replication and repair
03420 Nucleotide excision repair
GSTEN00009869G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00009869G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00009869G001
Enzymes [BR:
tng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSTEN00009869G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GSTEN00009869G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GSTEN00009869G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAF93977
UniProt:
Q4SZF5
LinkDB
All DBs
Position
undetermined
AA seq
841 aa
AA seq
DB search
MRRKTMKMMLGNESQEAVPAAAGKQVDVSIIKQDEYGAKDYRSQMQMKDDHASRPLWVAP
DGHIFLEAFSPVYKYAQDFLIAIAEPVCRPTHIHEYKLTAYSLYAAVSVGLQTSDIVEYL
QKLSKTSVPDGIVQFIKLCTVSYGKVKLVLKHNRYFVESAFPDVIQQLLQDTVIRECRLR
TADGADTELITEVIHSKSAVYASTSQQSSDSQMSSQQVPEDIFSYYEQMDKDXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELQKRCIHLEYPLLAEYDFRNDSV
NPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCL
VLGNSSVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWE
AERVMEWMRSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNF
LIGPKLFEANWMELQNNGYIAKVQCAEVWCPMTPEFYREYVAIKTKKRILLYTMNPNKFR
ACQFLIRFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKI
NTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAYFYSL
VSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLMLSSRDEQQQLLQKVLAASDL
DAEEEVVAGEVGARPQFSRRTGTMSSMSGADDTVYMEYQSRGSKAAAAHKNIHPLFKRFR
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggaagacgatgaagatgatgttgggaaatgagtctcaagaagctgtacctgct
gctgcagggaaacaagtggatgtgtccattatcaaacaggatgagtatggggccaaggac
taccgctctcagatgcaaatgaaggatgatcatgcctcacggccactctgggtggcccct
gatggccacattttcctggaagccttctctccagtgtataagtatgcccaggatttcttg
atagccattgcggagcctgtctgcagacctacccacatccatgagtacaagctgacagcc
tactccctttacgctgctgtcagcgtaggactgcagacctccgatattgtggagtacctg
cagaaactcagcaagacatctgtgccggacggaattgttcagttcattaagctctgtacg
gtcagctatggtaaagtgaagttggtgctgaagcacaaccggtattttgtggagagtgct
tttcctgatgtgatacagcagcttctgcaagacacagtgatccgagaatgtcgtctacgc
acggctgatggagcagacaccgaacttattactgaagtcatccacagcaagtcggcagta
tatgcttccacttcgcagcagtccagcgatagtcaaatgtcctcgcagcaagtcccagag
gacatctttagctactatgaacagatggataaagatgnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaagagcttcagaag
cgatgtattcacttggaatacccccttctagcggagtacgactttcgcaacgactcggtc
aacccagatatcaacatagacctcaagccaactgcagtgttgcggccctaccaggaaaaa
agtctgcggaagatgtttggcaatggacgcgctcgctcgggggtcatcgtgctgccctgt
ggagcgggtaaatcactggttggcgtgacggcggcatgcacagttcgcaaacgctgtctg
gtgctgggaaactcctccgtgtcagtggagcagtggaaggcccagttcaaaatgtggtcc
accattgatgactctcagatctgtcgcttcacctcggacgccaaggacaagcccatcggg
tgctccgtagccatcagcacctattctatgctgggtcacaccaccaagcgttcgtgggag
gctgagagagttatggaatggatgaggagccaggaatgggggctgatgatccttgatgag
gtgcacactattcccgccaagatgtttcgtcgagtcctgaccatcgttcaggcgcattgc
aaactgggactcaccgccacactggtcagggaagatgataagattgtagacctcaatttt
ctaattggtcccaagctgtttgaggccaactggatggaactgcagaacaatggatacatt
gccaaagtacagtgtgcagaggtatggtgcccgatgactccagagttctacagggagtat
gtggccattaagacaaagaaacggatcttgctgtatacaatgaaccccaacaagttccgt
gcttgccagtttctcattcgctttcacgaacgccgcaacgacaagatcattgtctttgct
gacaacgtctttgccttaaaggaatatgccattcgcctcaacaagccttatatctatggt
ccaacatcccaaggtgaacgtatgcagattcttcagaacttcaaacacaacccaaagata
aacacgatttttatctccaaggttggtgacacctcgtttgacttgccagaagccaatgtt
ttgattcagatctcctcccatggtggatcacgcagacaggaggcccagaggcttggcaga
gttctacgagctaagaaaggaatggtagcagaagagtacaatgcatacttctattcactg
gtctctcaggacacgcaggagatggcctactctacaaaaagacagaggttcttagtggat
caggggtacagctttaaggtgatcacaaagttggcaggcatggaggaagaagatttaatg
ctgtcctctagagatgaacaacagcagctacttcaaaaagtcctcgctgcttcagacttg
gatgctgaggaggaagtggtagcaggggaggtgggcgctcggccacagttttcaaggcga
acaggaaccatgagctccatgtctggagccgacgacaccgtctacatggaatatcagagt
cgaggcagcaaagccgcagcagcacataagaatattcatccactgttcaagcgttttcga
aaatag
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integrated database retrieval system
