Tetraodon nigroviridis (spotted green pufferfish): GSTEN00010069G001
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Entry
GSTEN00010069G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K09291
nucleoprotein TPR
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTEN00010069G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00010069G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTEN00010069G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
ERM_helical
DUF4164
Fib_alpha
Tup_N
Motif
Other DBs
NCBI-ProteinID:
CAF94122
UniProt:
Q4SZ10
LinkDB
All DBs
Position
undetermined
AA seq
1302 aa
AA seq
DB search
LEIQLKESEELQKQLEKRILEVEQMKQQEQETRRRAIDELEKHVSDLQRSLKASQAKEQE
ALERTAAAVTLEQKAIQDSLLQTKLAAEAQAKYERELMLHAADVEAIQELKKKAEEEAVK
KKELEIQVAKASSVLQEKVAAWNLVERQLKMTVERSELETCQRLNKKIDQLEAELVSAKT
KLEQEVAQKHKLGRSMDARLLEVRKQLESQNKLYLKTKELLLSSEQQAATLKAKLATASS
SEPAAATGPKLQLRVCIRRLIGNFRLYKLVCLCVPAPSQGSSQADKELQEVKGLIICVFT
INKATTRTLAAQERQLKKIEDIKVLQETNRMLKMDKEKLEQELLQTQARVTKLQSDISPL
HHSMSILSEKIGSLQADKKLLEEDLKRWKTKTQQLISQQKESETEERQKIASERRDQQRN
ISQLVEETTNLKNELARSTASCNSAQSQLQNLRDSVTHLTAERDALKKDLETKNNDILEK
NKTITQVKKIGRRYKSQYEELKIQHDKLVEDMSAKTKSATGLNQEVNKADEELVKVKEEL
NKLKEEAKKPLQELKEALKENQEIKDKLKDIQNQLIQKQNQLDETQNQLKSMQSQAQDSH
GHIQQLQGELQQAKEALQRSLDAQKELQQSHSQEVTNLKAAVSQAEIKVTKLQEDLDSLQ
KLCDGKNREEQLKKQIAEKDEKTKKVFLGAKTKISQLSNAKVQLSQEMEELKQSKKELEV
RMNALKSQYEGRLHRLERELRELRDARSHHSELSEEPQDQVGVKTRSSEQRKISLKSPAH
DRGSSSLSEPPTANIRPTPSTQSPGSKSSPSPGSKATPRASIRPMVTPTVPVPTPTATVM
PTTQAESQEVVINSGPSGSTQLPAITAPSSIQTTAFVQPTQQQVGFSVDMEQPSTSSFIG
PGKPDPCQHFTSWFKARKRGRRLNLKRLRRWTITESKQMSWMTISLNEDEESIEQDGTSQ
SVPSDPLSSQNFIIAETDSSSCESKLREKHPNICEEAQQEEDGDEEIKAEEMCEVDNAGD
RGTRRSEDGHIASKQSSEEGREGKHADTPHTEDTSDPGRPSEEAPSGEGTSSAAASESSL
RKDPAHLVLSSSPSTISSSSPSLPQPRRTSHPLPPRLYIQPPPPELHFQRHPLPLPRPSG
GRGPQLTPGVGSMQHFFDDEDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGLSTSFRFGLP
DDVLSQASASHSDLGQLASQGGLGMYESPLFLAAHDEDGGGRSVPTTPLQLAAPVTVFTE
SLPSDGAESVTSQSVPMVSAAAGVAAAADERDEAFAEQDEEE
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
ctggagatccagctgaaggagtcagaggagttgcagaaacagttggagaaaagaatttta
gaagtggaacagatgaaacagcaggaacaagaaacaagaagacgagccatcgatgaatta
gaaaaacatgtgtctgatctgcagcgcagcttgaaggctagccaggccaaggagcaggaa
gcactagagagaactgctgctgctgttaccctggagcaaaaggctatacaggacagtttg
ttacagacaaaattagcagctgaggcacaggctaaatatgaaagggagctaatgctccat
gctgcggacgttgaagccattcaggagctgaagaagaaagctgaagaggaggcggtgaag
aaaaaggagcttgagatccaagtggccaaggcctcatcggttctacaggaaaaagtggca
gcttggaacctagtggagagacagttgaagatgactgtggagcgttcagagcttgaaacc
tgccagcggctgaacaaaaaaattgaccaactggaagcagaacttgtttcggcgaagacg
aagctggagcaagaagtagcacagaaacacaaacttggccgctctatggatgctcggtta
ctagaagtcaggaaacagctggagagccagaacaagctgtatctgaaaaccaaggaatta
ctgctctcctcggaacaacaagctgccaccctaaaggcgaagttggctacagcttcatcc
tctgaacctgctgcagctacaggccccaagctgcagttgagagtatgtattaggcggtta
attgggaattttaggttgtacaaacttgtgtgtttgtgtgttccagcaccctcccagggg
tccagccaggcagataaggagcttcaagaagtaaaagggttaataatatgtgtgtttacc
ataaataaggctacaacaaggacactggctgcacaggaacggcagctgaaaaaaattgaa
gatatcaaagttctccaagaaacaaacaggatgttaaaaatggacaaagagaaactggag
caggagctactccaaactcaagctcgagttacaaaactccagtctgacatcagcccgttg
catcactcaatgtccatactgtcagagaaaattggctcccttcaggctgataaaaagttg
ctagaagaagacctcaaacgctggaagacaaaaactcaacagctgatcagccagcagaaa
gagagtgagactgaggagagacagaaaattgcctctgagagacgagaccagcagaggaac
atttcacagttggttgaggaaaccaccaacctgaagaatgagttggccagatccactgcc
agctgtaactctgctcagtcccaactgcaaaacctcagagactcagtaacccatctgaca
gcagagagagacgctctcaagaaggacttggaaaccaaaaacaatgacattttggagaag
aataagaccatcacacaagtcaagaagattgggcgccgctacaaaagccaatatgaagag
ctgaaaatacaacatgataagttggttgaggatatgtctgccaaaacaaaaagtgctacg
ggcctaaaccaggaagtgaataaagcagatgaagagctcgtgaaggttaaagaagaattg
aacaaactaaaagaggaggcaaaaaaacctctccaggagctgaaagaagcactgaaggaa
aaccaagaaataaaggacaagcttaaagacatccaaaaccagttaatccagaaacaaaac
caactggatgagacacaaaaccagttaaaatccatgcagtcccaagcacaggacagccat
ggccatattcagcagctccagggggagctccagcaggctaaggaagcacttcagcgcagc
cttgatgctcagaaagagctccaacagagtcacagtcaggaagtgaccaacctcaaggct
gctgtcagccaagcagagatcaaagtgaccaagcttcaagaagacctggacagcttgcaa
aagctctgtgatggaaagaacagggaagagcagcttaaaaagcagattgctgaaaaagat
gaaaaaacaaagaaggtcttcttgggagcaaaaaccaaaatctctcagctcagtaatgcg
aaggtacagctcagtcaggaaatggaagagctgaaacagagtaagaaggagctggaggtg
agaatgaatgccctcaagtctcagtacgaaggccgtcttcatcgactagaacgagaactt
agagaactgagggatgcccgctcgcaccattctgagctcagtgaggaaccacaggaccaa
gttggagtaaagaccagatcttcagagcagagaaagatatctctgaaaagtcctgcccac
gacagggggagctctagtttgtctgaacctcctactgctaacatccggcccaccccaagt
acgcaatctccgggcagcaagtcaagtccctcacctggcagtaaggccacaccccgtgcc
agcatccgaccgatggttactccgaccgttccagtcccaactcctactgccaccgtcatg
ccaaccacacaggctgaaagtcaagaggtcgtgatcaattctggaccctccggctccact
cagctccctgccataacggcacccagcagcatccagaccacagcgttcgttcagccgact
cagcagcaagtgggcttcagtgtggacatggagcagccctctacttcatcttttatcggc
ccaggcaagcctgatccctgtcagcattttacatcctggttcaaagcgaggaagagagga
agacgactgaacctgaagagattgaggagatggacgataacagagagcaagcagatgtct
tggatgacaatcagcctaaatgaagatgaggagagcatcgagcaagacggaacatcacaa
tcggtcccctctgatcccttgtcttcacaaaacttcatcattgcggagacagacagcagc
agttgcgaaagcaaactgagagagaagcatccaaacatttgtgaggaggcccaacaggag
gaagacggggatgaggagattaaggcggaagagatgtgtgaagttgacaacgccggcgac
agagggacgaggcgaagcgaggatggtcatatagccagtaagcagtcatcagaagaagga
agggagggcaagcacgcggacacgccccatactgaggacacgtcagacccaggccgtcct
tctgaggaggcacccagtggtgaaggcaccagcagcgcggccgcgtcagagtccagcctc
cgcaaagacccagcgcaccttgtgctgtcctcatccccctccaccatctcctcctcttca
ccgtcccttcctcaaccacgcaggacctcccatcctctaccaccaaggctctacatccag
cccccaccgccagaactacacttccagaggcatcccttgccgttacctagaccatcaggt
ggacgtggaccccagctcacccctggtgtagggagcatgcaacatttctttgatgatgaa
gacagaatggttcccagcactcccacgctagtggttccacaccgtacggatggctttgct
gaagccatacactcccctcaggtggcaggtctgtccaccagcttcaggtttggacttcca
gacgatgtgctttctcaggcatcagcctcacactctgacttaggtcagctggcctctcaa
ggaggtttagggatgtatgagtcccctctgtttctcgcagctcatgacgaagatggagga
gggagaagtgtgcccaccacacctttacagctggctgccccagtcactgtctttacagag
tctctgccctcagacggcgctgagagcgtgacgtcccagtccgtaccgatggtaagcgcc
gccgccggcgtggccgctgctgccgatgagagagacgaggcgtttgcggagcaggacgaa
gaagaa
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