Tetraodon nigroviridis (spotted green pufferfish): GSTEN00010189G001
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Entry
GSTEN00010189G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10754
replication factor C subunit 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03030
DNA replication
tng03410
Base excision repair
tng03420
Nucleotide excision repair
tng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSTEN00010189G001
03410 Base excision repair
GSTEN00010189G001
03420 Nucleotide excision repair
GSTEN00010189G001
03430 Mismatch repair
GSTEN00010189G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tng03032
]
GSTEN00010189G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00010189G001
DNA replication proteins [BR:
tng03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GSTEN00010189G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GSTEN00010189G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
NTPase_1
AAA_30
AAA_16
nSTAND3
RuvB_N
AAA_19
AAA_18
AAA_31
Motif
Other DBs
NCBI-ProteinID:
CAF94208
UniProt:
Q4SYS4
LinkDB
All DBs
Position
undetermined
AA seq
775 aa
AA seq
DB search
MDRELWGSKEIPQGAENCLEGCVFVLTGVLESMERDETKSLIERYGGKVTGNISKKTTYL
VQGRDCGVSKLEKAESLGTKILDEDGLLELIRTKPGKKSKYEIAAEAEVGAHSIVSLTHK
ASKSTPTTQKISPSKGNSTSPHTPSPSKTSLGQGHTSRTREGRTPPGRGSAQTARRELSL
SSSNSSSSPAEAAVPRRTAGDEALLWVDKYRPRSLKAVIGQQGEQSCANKLLRWLQNWHR
HHGGGTLKAPAKTGKFGGKDDGSGYKAALLSGPPGVGKTTTASLVCEVSPCLSSGGKRVF
GVDGFLSLSLSVSSHAGFHGHLQELGFSYVEMNASCTRSKNSLKEVVAESVNNTSIENFY
RGTSQTVSSKHVLIMDEVDGMAGNEDRGGIQELIALIKGSKIPIICMCNDRNHMKIRSLA
NYCFDLRFQRPRVEQIKAAMMSIAFKEGIKNLAPALNEIILASNQDVRQVLHNLSMWTAT
DKVMSYDRCKADAAKARKDMKIGPFEVCRKVFSAGEEAAHMSLMDKSDLFFHDYSLAPLF
VQENYLNVRPAAAGGNLKSHLMLLSKTADSISDGDLVDRRIRSGQNWSLLPTQAIYASVL
PGELMRGYMSQFPSFPSWLGKNSSAGKHSRIVQELTAHMGLKTMSSRQAVNLDYLHYLRQ
ALLRPLQRSGAEGAGEAVQILDDYQLIKEDVDSMMEISVWGNQADPYSKLDSKVKAAFTR
AYNKEVHLTPYALLAVKKSRRGGGGESEGGGEDVDSQPQESEDEGESLQTDAMIK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagagctctggggatccaaggaaatcccgcagggtgcagaaaactgcctggag
ggctgcgtgttcgtgctgactggcgtccttgagtcgatggagcgggacgagaccaagtcc
ctcattgagcgctacgggggcaaggtgacgggcaacatcagtaagaagaccacctacctg
gttcagggcagagactgcggagtctccaaacttgagaaggcggagagtttgggcacaaag
atcctggatgaggatggtctgttggagctgatcagaaccaaaccaggaaagaagtccaag
tatgagatcgctgctgaggctgaggttggtgctcatagcatcgtgtcactaacacacaaa
gcctccaaaagcacccctacaacccagaagatttctccctccaaaggtaactccacctct
ccccacacccccagcccgtcaaagaccagcctgggtcagggccacacctccaggaccaga
gagggccggacaccgcccgggagaggttcggctcagaccgcgcgccgggagctcagcctc
tcctcctccaactcctcttcttcgcccgcggaggccgcggtcccccgacggacggcgggg
gacgaagctctgctgtgggtggacaagtaccgcccacgctccctgaaggctgtgattggt
cagcagggggagcagagctgcgctaacaagctgctgcggtggttgcagaactggcacaga
caccatggcggagggactctgaaagccccggcaaagaccgggaaatttggagggaaagac
gacggatcgggttacaaggccgctcttctgtccggacctccgggagtggggaagaccacc
acggcttccctcgtctgcgaggtcagtccatgtctctccagcgggggcaaacgtgtcttt
ggggtggacggctttctctctctctctctctctgtctcctctcacgctggttttcacggc
cacctgcaggagttgggcttcagctatgtggagatgaacgccagctgtactcgcagcaag
aacagcctgaaggaggtcgtcgccgaatcggttaacaacaccagcatcgagaacttttac
agaggcacgtcccagacggtgagcagtaaacacgtcctcatcatggacgaggtggatgga
atggccggcaacgaggaccgcggaggaatccaggagttaatagccctgatcaaaggctca
aagatccccatcatctgcatgtgcaacgaccgcaaccacatgaagatccgatcgctggca
aactactgcttcgatctgcgcttccagagaccacgagtggaacagataaaggccgccatg
atgtccatcgctttcaaggaggggatcaagaacctcgccccggctctgaatgaaatcatc
ctggcctccaaccaggatgtgcgacaggtgttgcacaacctcagcatgtggacggccaca
gacaaggtgatgtcctacgaccggtgcaaggctgacgccgccaaggctcgcaaggacatg
aagatcggtcccttcgaggtctgccggaaggtcttttccgcgggagaggaagccgcccac
atgagcctcatggacaagtccgacctcttcttccacgactactcgctagcgcccctcttt
gtccaagaaaactacctcaacgttcgtccagcagcggctgggggtaacctgaagtcccac
ttgatgctgctcagcaagacggccgattccatttccgacggagatctggtggaccggcgc
atccgctcgggacagaactggtccctgctgcccacgcaggccatctacgccagcgtgctg
cccggggagctcatgcgaggatacatgagccagttccccagttttcccagctggctcggc
aagaactcctccgccgggaaacactcgcgcatcgtgcaggagctgaccgctcacatgggt
ctaaagaccatgagcagcaggcaggcggtcaacctggactacctgcactacctgcgacag
gcgctgctgaggccgctccagaggagcggagcggagggcgccggcgaagccgtgcagata
ctggacgactaccagctcatcaaggaagatgtcgacagcatgatggagatcagcgtctgg
ggaaatcaggccgacccctactccaaactggactccaaggttaaagcagcattcacgcga
gcctacaacaaggaggtccacctgacgccatacgcgctgctagcggtgaagaagagccgt
cgcggtggaggcggagagtctgaagggggaggcgaggacgtggacagccaaccgcaggag
tccgaggacgaaggggaaagcctccaaacggacgctatgatcaaa
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integrated database retrieval system
