Tetraodon nigroviridis (spotted green pufferfish): GSTEN00010561G001
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Entry
GSTEN00010561G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GSTEN00010561G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00010561G001
03021 Transcription machinery [BR:
tng03021
]
GSTEN00010561G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00010561G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Helix-turn-helix
ARID
GSTEN00010561G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
GSTEN00010561G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
GSTEN00010561G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
FOXP-CC
TSTD2_N
Pox_D5
Motif
Other DBs
NCBI-ProteinID:
CAF94469
UniProt:
Q4SY13
LinkDB
All DBs
Position
undetermined
AA seq
1231 aa
AA seq
DB search
MEILGNLSKVDDNAVLICEYVDQDSYREVTMLLTLPDLMLLMACLEVLYLLAQLGEVPCS
KIASVDRSIGESSSPALASGVAVAAQTLWRLFFRSDLLVRLVSVDLHTFGPDALTAVRLI
EHQTNAEQAAEVRPQLVEQVPAAVQGAPAVVMTRPSVQANQPPAGIVELDGEKFTLQWLN
AHFEANPDGSVSRSEMYSEYLTTCSKMGRSNILNSTGFLKCLRTVFPNHTMRRQDEVKSS
SQIQIFLVGLRRRTMPLPIPLYYQQPQQQQPSPHTVAAAPPAATAARQDAPADSQALPPG
LPPGHHALGPHLVRALVPSTSCVSPGVLTSQEVSHTSHSAASPHPSPQQVSPQLAPNSSG
AAQGSGQAFSVATAASPQGSRVTFQNIAPKPAPNPSGVPAAAVATPNQQPQQQAQGVVIV
NPSPQQNPAYAPAIHQIVLANPSAISGAPTLQIAGQPGAAPAPCPSHVSNQVQSNQTVSQ
TLSMKRQQQQQLPLMSQTPPPQPTSTESSLIKQLLLPKRGPSTPGGKLILPAPQMPLPNS
TIAPAPQVIYQTSYNAQTPSPQPPQLNVQLVPGQLPAVGAPAVQTVQLLPGQLISTSSAG
ATAIIQGPTAAGQVTFAVVPSTGFGTSTAAAVAAVSQGTVTQGVPPPLYSTGTLPQHAPA
TPPPPLPAPLRGDKIICQKEEEAKDATGLHVHERTIEVMENSSLAEGNSPNGKTSNGDVG
PCAKLLNGQKCMESNLPPYHSGNSQGALNGPATEIQPANGKQALSSNPSAPPEDGSDPKK
ALVNGVCDFERGDNGGNCNKNIPNHIASKQPYLGNGELGSSEKSHGSEPPLPSPPPQQDT
AKAQPPERLANGPQAAGSRPPSELTNGPSIPAHAAPVLRQQLLPNSAFPPSVPLASQGSA
AAASPSPANGVTPESRGLKRAAESEDRGGAAASSSGIPNKVGVRIITISDPNNAGSSATM
VAVPAGTDPSTVAKVAIENATQQRNGSPTQAAVSTPTVTPSPPPASQPAPSGNHSPHLPA
QQAASAPPEPARKTGQNFKCLWQSCKRWFETPSQVFYHAATQHGGKEAYGGHCLWEGCEP
FPRQRLSFITHLQDKHCSREALLAGLKLEEQQAQSPNQSSSQTSSEAGSSTPAQQKPKAI
VNHPSAALMALRRGSRNLVFRDFTDEKEGPVTKHIRLTAALTLKNIAKHSECGRMLVKRH
ETHLSVLALSNMEVSTTLAKCLYELTRSLQA
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggagatcctgggaaatctcagcaaagtggacgacaacgcggtgctgatctgcgagtac
gtggaccaggactcctaccgggaggtgaccatgctcctcacgctccccgacctcatgctc
ctcatggcttgcctggaggttctgtacctgctggcccagctcggagaagttccctgcagc
aagatcgcctccgtcgaccgtagcataggtgagagctcctcacccgctttggcttccggt
gtcgctgtggccgcgcagactttatggcgtctttttttccgctcagacctgttggtgcgg
ttggtatcggtggacctgcacacgttcggacccgacgctctgaccgccgtgcgactcatc
gagcatcagaccaacgctgagcaggcagccgaagttcggccgcagctggtggagcaggtg
cccgcggccgtccaaggagcaccagcagtcgtcatgacgaggccctcggttcaggccaat
cagccaccggccggcattgtggaactcgatggggagaagtttactctgcaatggctaaac
gcacacttcgaggccaaccccgacggctcggtgtcacgctcagaaatgtactccgagtac
ctgaccacctgcagtaaaatgggacgaagtaacatcctcaactccaccggcttcctcaaa
tgtctgaggaccgtgtttcccaaccacacaatgcgacgacaggacgaggtcaaatccagc
agtcagattcagatttttctggtgggtctgaggaggaggacgatgcccctgcccatcccg
ctgtactaccaacaacctcagcagcaacaaccgtcaccgcacacagttgcagctgcacca
cccgcagcaacggcggcccggcaggacgccccggcagactcgcaggccctgcctccagga
ctacctcctgggcatcacgctctcggaccccacctagttcgggccctggtccccagcacc
agttgtgtgtctccgggggtcttgacgtcccaggaggtgtcccacacaagccactcagct
gcttcgccgcacccgtcgccccagcaggtgtctccgcagttagcacccaattcttcaggg
gcagcacagggaagcggtcaggctttcagcgtcgctaccgcggccagtccccagggctcg
cgcgtcacctttcagaatatcgcccccaaaccagctcccaacccgtcaggcgtgcccgca
gcagccgtagccacacccaaccagcagcctcagcaacaggcgcagggcgtcgtcatagtg
aaccccagcccccagcagaacccggcctacgcccccgccatccaccagatcgtcctggcc
aacccttccgccatttccggcgccccgaccctccagatagccgggcaaccgggagctgct
cccgccccctgcccgtctcacgtcagcaaccaggtgcagtccaatcagacggttagccag
actctgtccatgaaacggcagcagcagcagcagctcccgctaatgtcccaaacacctcct
ccacagcctacctccaccgagtccagcttgatcaaacagttactgcttccaaagagaggg
ccttccaccccgggaggcaagcttatactccccgccccgcagatgcccctacccaacagc
accatagctcccgctccgcaggtcatctaccagacgagttacaacgctcagaccccgtct
ccgcagcctccgcagctcaacgtgcagctggttcccgggcagcttcccgccgtcggggcc
ccagctgtccagactgtgcagctgttgccgggtcagctcatttcaaccagcagcgccggg
gcaacggccatcattcagggtcccacggccgccgggcaggtgacgttcgccgtggtcccc
agcacgggcttcggcacctccacggccgccgccgtcgccgccgtcagtcagggcactgtg
actcagggggtccccccgcctctgtattctactggaacgctaccccagcacgcccccgcc
acccccccgccgcccctgccggctccgctccggggagacaagatcatttgtcagaaagag
gaggaggccaaggacgccacggggctgcacgttcacgaaagaacgatagaggtgatggag
aactcctccttggccgaggggaactcccccaacgggaagaccagtaacggcgacgtcggg
ccctgtgccaagctgctaaacggtcagaagtgcatggagtccaatctacctccatatcac
tcagggaacagccaaggggcactcaacggcccggctacagagattcagcccgctaacggg
aagcaggccctctcctccaaccccagcgcccccccggaggacggctccgaccccaaaaag
gctctggtcaacggggtgtgtgacttcgagaggggcgacaacggcggcaactgcaacaaa
aacattccaaatcacatcgcttccaaacaaccgtacctggggaacggagagctgggctcc
tcggagaagagccacggatccgaacccccgcttcccagccctcctccccaacaggacact
gccaaagcccagccgccggagcgcctggccaacggcccccaggcggcgggcagcaggcct
ccctcggaactaaccaacggaccttcgatcccggcgcacgccgcccccgtgctgaggcag
cagttgctccccaattccgccttccccccgagcgtccccctcgcctcccaaggttccgcc
gccgccgcctccccctcgccggccaacggagtgacgcccgagagccgaggcctgaagaga
gcggcggaaagcgaggaccgcggcggcgcggcggcgtcgtcctcgggcatccccaacaaa
gtgggcgtgcgcatcatcacgatcagcgaccccaacaacgccgggagcagcgccaccatg
gtggccgtaccagcaggcacagacccaagcacagtagccaaagtagccatagagaacgcc
acgcagcagaggaacggctctcccacgcaggcagctgtctccacgccaaccgtgaccccc
tccccgccccctgcctcccagccagcaccaagcggtaaccacagccctcacctcccagcc
cagcaggcggccagcgcgcccccagagcccgccaggaagaccgggcagaacttcaagtgt
ctgtggcagtcctgtaaacggtggttcgaaacgccgtcgcaagtgttctaccacgcagcc
acgcagcacggtgggaaagaggcgtacggaggccactgcctgtgggaaggctgcgaacct
ttccccaggcagagactctccttcatcacgcacctacaggataaacactgttctagagag
gctttgctagctgggctgaaattagaagagcagcaggcgcagagtcccaaccagtcttct
tcccaaacctcgtcagaggcgggcagcagcacccccgcacagcaaaaacccaaagcaatc
gtgaatcaccccagcgcggctctcatggccctgcgcaggggctctcgaaacctggtcttc
agggacttcactgatgagaaagagggaccggtgacaaaacacatcagactaactgctgcc
ttaacgttaaagaacatcgccaagcactcggagtgtggtcgcatgttggtaaagaggcac
gaaacgcacctctctgttctcgcactaagtaacatggaagtttccaccacgctcgccaaa
tgcctttatgaactgacgcgctcgctccaggcctga
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integrated database retrieval system
