Tetraodon nigroviridis (spotted green pufferfish): GSTEN00010844G001
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Entry
GSTEN00010844G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14961
COMPASS component SWD1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00010844G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
GSTEN00010844G001
COMPASS/SET1 complex (yeast)
GSTEN00010844G001
MLL-HCF complex
GSTEN00010844G001
MLL3/MLL4 complex
GSTEN00010844G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
WD40
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_RIG_2nd
WDR54
Beta-prop_WDR11_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
Beta-prop_LRRK2
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-ProteinID:
CAF94650
UniProt:
Q4SXI2
LinkDB
All DBs
Position
undetermined
AA seq
493 aa
AA seq
DB search
LPESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISA
HIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQCHPRDMDKVL
VCPMKSAPVLLTLSDCKHVVLPVDDDSDLNVVAAFDRRGEYIYTGNAKGKILVLNTDTQE
LVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRDHQGVRRQGDPDLRPRRRARTHAE
AAGPGQQDSLEALLLLGRWGVHRGRLGQAARPLHLGEEHRQPGEDPARNQRGAAAGRGGK
ATAPPPSSLGVLRAAAHSALLCSVASCATDHRLHLQRGCVHLGPEPSGADAAEDEEVDVT
TVDPIVAFCSSDEELEDNRALLYLPIAPEVEDPEENPFGPPPDASGLSGAGEDAGAGADK
KQRQPCSEMGPAKKKARTTTIELKGVPSDEVHPLLGVKGDGKSKKKTAGRPKGSKGKDKD
FPFRPKPHKGEQP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
ctcccagagtcatttgggcagaactatccggaggaggctgatggcaccctggactgtatc
agcatggccctcacctgcacgttcaaccgctggggcacgctgctggcggtgggctgcaac
gacggccgcatcgtcatctgggatttcttgacccgcggcattgccaaaattatcagcgca
cacatccacccagtgtgctccctgtgctggagtcgagatggccacaagcttgtgagcgct
tccacggacaacatcgtgtcccagtgggacgtcctcactggagactgtgaccagaggttc
cgcttcccctcccccatcctgaagctgcagtgccaccccagagacatggacaaggtcctg
gtgtgtcccatgaagtccgcccccgtcttgctgaccttgtcagactgcaaacacgttgtg
ctgcccgtggacgacgactcggacctgaacgtggtggcggcttttgacaggcggggggag
tacatctacaccggcaacgccaaaggaaagatcctggtgttgaacacggacacgcaggag
ctggtggcgtccttcagggtgaccacgggcaccagcaacaccaccgccatcaagtccatc
gagtttgctcgcaaaggaagctgcttcctgatcaacacggccgaccgcgatcatcagggt
gtacgacggcagggagatcctgacctgcggccgcgacggcgagcccgaacccatgcagaa
gctgcaggacctggtcaacaggactccctggaagcgctgctgcttctcgggcgatgggga
gtacatcgtggccggctcggccaggcagcacgccctctacatctgggagaagagcatcgg
caacctggtgaagatcctgcacggaaccagaggggagctgctgctggacgtggcggtaag
gccacagctcctccccccagcagcctgggggtcctgagagctgctgcccactctgccctc
ctctgctcagtggcatcctgtgcgaccgatcatcgcctccatctccagcggggttgtgtc
catctgggcccagaaccaagtggtgcggacgctgccgaggatgaagaggtggacgtcacc
accgtcgaccccatcgtcgccttttgcagcagcgacgaggagctggaggacaacagggct
ctgctctacctgcccatcgcccccgaggtggaggatccggaagagaacccgttcggcccc
ccgcccgacgcctccggcctgagcggcgccggcgaggacgctggcgccggcgcagacaag
aagcagaggcagccttgctccgagatgggcccggccaagaaaaaggcccgcactaccacc
atcgagctgaagggggtgcccagtgacgaggtgcaccccctactgggcgtgaaaggagac
ggcaagtctaagaagaagactgcgggtcggcccaaaggctcgaaaggtaaagacaaagac
ttccccttccggcccaagccccacaagggcgagcagccc
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