Tetraodon nigroviridis (spotted green pufferfish): GSTEN00011330G001
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Entry
GSTEN00011330G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10168
toll-like receptor 5
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04620
Toll-like receptor signaling pathway
tng05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
GSTEN00011330G001
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
GSTEN00011330G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tng04054
]
GSTEN00011330G001
Pattern recognition receptors [BR:
tng04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
GSTEN00011330G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_6
LRR_9
LRRCT
Motif
Other DBs
NCBI-ProteinID:
CAF94909
UniProt:
Q4SWS3
LinkDB
All DBs
Position
undetermined
AA seq
838 aa
AA seq
DB search
PSCTLYLLVADCAFKDHLWVPVLPPNITHLFLNTNLIGEVNSTSLSAYEQLEKLDLGHQK
VALVIRSNAFLRQRKLSVLVLGFNPGLRLEPRTFAGLFRLQQLSLDYCELNHTVLAGSYL
EPLLSLRKLDLFGNQISALRPGRFFSKLQHFTELNLKLNPIERLCESDLAGFQGKHFGYL
SLSSTRIGRMRSATFDWERCGNPFRHISFGTLDMSGHGFDLKTLSRFFKAIQGTLIEHLI
LHGHMGRDFSYANLPDPEEETFQGLGSSGIQTLDLSGNRIFALNRAVFQPLGNMRILDLS
RNKINQIETRAFDGLQADLRLLNLSSNLLGEIYAHTFSSLAELRVLDLSQNHIGALGHQA
FSGLPKLRGLFLTGNSLRNLGFPASLPNLELLLLGDNKLDSLYGVADLAGNSTYLDVRDN
RLSNLNNVHLLLSRFHHLKELMFGGNFIKWCQLNGEPPIPPNSSLKVLDLHDSSLQTIWS
RGQCLDLFHHLNHLQGLNLSFNFLEKLPLGVFSGLSSIQEIDLSFNALTYLPSDGFPASL
SILHIAGNFLASPEPGILRSLDYLDLEGNRFHCDCHLEAFLAWLNVTRVTHLSPVAKYAC
AFPAALQNLPLLSYSRSMEPCEVDDEESTRGLRFALFVLTSSLVTAAVLCGAAYARLRGH
IFIVYKKILRRVVDDPKRAATADEGQYDVFLCFSSGDYRWVEAAVLKKLDSQLSEGNAFR
CCFEARDFLPGEDHLSNIRDAIWGSRKTLCIVSNRFLKDGWCLEAFTLAQGRMLEELTNT
LVMLVVGKVAHYQLMRCNAVRAFVQKREYLTWPEDPQDLDWFYQKLISLLLKHTKVKK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
ccatcatgcactttgtatctcctcgtcgctgactgcgcttttaaagaccacctctgggtt
ccagtcctgcctcccaacatcacccacctcttcctcaacaccaaccttatcggggaggtc
aacagcacctccctcagcgcctacgagcagctggagaagctggacctgggccaccagaag
gtggcgctggtcatccggagcaacgccttcctgcggcagaggaagctgagcgtcctggtg
ctcgggttcaaccccggccttcggctggaacccagaacgttcgcggggctcttcaggctc
cagcagctctccctggattactgcgaattgaaccacaccgtgctggcgggaagctacctg
gagccactcctgtctctgcggaagctggacctcttcgggaatcagatatccgccttgcgt
cccggtcggttcttctcaaaactccagcattttaccgagctgaacctgaagttgaacccc
atcgagagactgtgcgagagcgatctggcgggtttccaagggaagcactttggctacctc
agcctgagctccaccagaatcggcagaatgaggagcgcgacctttgactgggagaggtgt
gggaaccccttcaggcacatctctttcggaacgttggacatgtctggacacggatttgac
ttgaaaacgctgagccggtttttcaaagcgatccaggggactttgatcgagcatctgatc
ctgcacgggcacatgggcagggacttttcctacgcgaacctgcccgaccccgaagaggag
acgttccagggcctcggcagcagcgggattcaaactctggacctgtcgggaaaccggatc
tttgctctgaacagggctgttttccaacctctggggaacatgaggattctggacttgtcc
aggaacaaaatcaaccagatcgagacgcgcgccttcgacgggctccaggccgatttacgg
ctgctcaacctgtcgtccaacctgctgggggagatctacgcccacaccttcagcagcctg
gcggagctcagagtgctggatctgtcccagaaccacatcggcgctctgggccaccaggcc
ttcagcggccttcccaagctgcgcgggctgttcctgacggggaactcgctccggaacctc
ggctttcccgcctctttacccaacctggagctcctcctgttgggagacaacaagctggac
tctctgtacggcgtggccgacctggcggggaacagcacctacctggatgtccgggacaac
aggctgagcaacctgaacaacgtccacctgctcctgtctcgatttcatcacctgaaggag
ttaatgtttggcgggaacttcatcaagtggtgccaactgaacggggaacctccgatccct
cctaacagttccttgaaagtgctggatctccacgacagttccctgcagaccatctggtcg
cggggccagtgcctggacttgttccaccatctcaaccatctgcaagggctgaacctgagc
ttcaacttcctggaaaagctcccactgggagttttctccggcctgagctcgatccaggag
atcgacctctccttcaacgctttaacgtacctgccgtcggacggcttcccggccagtctg
tccatcctccacatcgccgggaacttcctggcctccccggaacctgggattttgcgatcg
ctggactacctggacctggaagggaaccgtttccactgcgactgccacctggaggccttc
ctggcgtggctgaacgtgaccagggtcacacacctgagcccggtggccaagtacgcctgc
gcctttccggctgcgctccagaacctgcctctgctcagttactccaggagcatggaaccc
tgcgaggtggacgacgaagaatccacccgcggacttcggttcgcgctcttcgtactcacg
tccagcctcgtcaccgcagccgtcctctgcggggccgcttacgcccgtctccgaggtcac
attttcatcgtgtataaaaaaatcctcaggagggttgtggacgaccccaaacgggcagcg
actgcggacgagggccagtacgacgtcttcctctgcttcagcagcggggactacaggtgg
gtggaggctgccgtgctgaagaagctggacagccagctctcggaaggaaacgccttccgc
tgctgcttcgaggccagggacttcctgcccggggaagaccatctctccaacatcagggac
gccatctggggcagccgcaagaccctgtgcatcgtctccaaccgctttctgaaagacggc
tggtgtttggaagcattcacgctggctcaaggtcgcatgttggaggagctgacaaacact
ctagtgatgctggtggtaggaaaagtggcgcactatcagctgatgaggtgtaacgcagtc
agggcgttcgtccagaagagggagtacctgacctggccggaggatcctcaggacctggac
tggttctaccagaagctcatctcactgctgctcaaacacactaaagtgaaaaag
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