Tetraodon nigroviridis (spotted green pufferfish): GSTEN00011485G001
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Entry
GSTEN00011485G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K12883
nuclear cap-binding protein subunit 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03013
Nucleocytoplasmic transport
tng03015
mRNA surveillance pathway
tng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTEN00011485G001
09122 Translation
03013 Nucleocytoplasmic transport
GSTEN00011485G001
03015 mRNA surveillance pathway
GSTEN00011485G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00011485G001
03041 Spliceosome [BR:
tng03041
]
GSTEN00011485G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
GSTEN00011485G001
Spliceosome [BR:
tng03041
]
Common components
Common spliceosomal components
Cap binding complex
GSTEN00011485G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-ProteinID:
CAF95006
UniProt:
Q4SWH6
LinkDB
All DBs
Position
1
AA seq
154 aa
AA seq
DB search
MSATLNALSSDSYIDISQYRDQHFKGKCSEQEKLLKTTHTLYVGNLSFYTTEEQVHELFS
KSGDVKRIIIGLDKVKKTACGFCFVEYYTRAGAENAMRFLNGTRLDDRIIRTDWDAGFKE
GRQYGRGKSGGQVRDEYRQDYDPARGGYGKLAQQ
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaacactaaacgcgttgtctagtgattcttatattgatattagtcagtataga
gaccagcattttaagggaaaatgttctgagcaagagaaactactgaagacgacacacact
ttatacgtgggaaatctttctttctacaccacggaggagcaggtgcatgagctgttttca
aaaagcggagatgtgaagcgaatcatcatcggtctggataaagtcaagaagacagcctgt
ggcttttgttttgtcgaatattacacccgagccggtgcagaaaacgccatgcgcttcctt
aacggtacacgactagatgatcggatcatcaggacagactgggatgctgggttcaaggaa
ggacgacagtatggtcgtggcaaatccgggggtcaggtgagagatgagtaccggcaggac
tacgacccagccagaggtggatacggtaaactggctcagcag
DBGET
integrated database retrieval system
