Tetraodon nigroviridis (spotted green pufferfish): GSTEN00011777G001
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Entry
GSTEN00011777G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14569
ribosome biogenesis protein BMS1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTEN00011777G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tng03009
]
GSTEN00011777G001
Ribosome biogenesis [BR:
tng03009
]
Eukaryotic type
90S particles
GTPase
GSTEN00011777G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
AAA_22
AAA_16
RNA_helicase
AAA
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CAF95218
UniProt:
Q4SVW4
LinkDB
All DBs
Position
undetermined
AA seq
1017 aa
AA seq
DB search
KGKTQKRHQHKQSGPKAEKKKLRKQESSTENEGRRNPKAFAVQSAVRMAKTFHRAQDLKT
RKHHVPGVDRSPSEPPPVMIVVVGPPKVGKSTLIRCLIKNFTRQKLGEICGPVTVVSGKT
RRLTFVECNNDINTMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPRIMGVLTH
LDSFKNNKTLRKTKKNLKHRFWTEVYQGAKLFYLSGMVYGEYQTQEVKNLGRFITVMKVH
PLVWQTCHPYVLADRMEDLTDPERLRTDPKSDRTVSLYGYLRGTHIKNQGQVHIPGVGDF
QVTDINFLPDPCPLPDAQKKRALNEKERLLYAPMAGVGGLVYDKDAVYIDLPANHINQQE
DVRPTTELVQSLIDTHTTLDAKIAKSKMSLFKDSATLDSSGFDNQNSLRWKEGLQQKASD
AFLRQQEVAPNLRKLVYASVAERTNPEDEDQELGGMFRVSCPQKTKKHQANALDCSRFYT
STSHDWTSEEMMNSIRDCFVTGKWDATQDAATLLKQDEELYGDFEDLETGEVHKGGDTEQ
DPAENIECDETEECIKADEEELQKKRLEKKRKLRELFNERYDDGDATYLDVLKEEGQKQG
ELNRAEFENMDDDARVQYEGFRPGMYVRVEISSVPCEFVSNFDPHYPIILGGLGSSESSV
GYLQMRLKKHRWHGRILKTRDPIILSLGWRRFQTMPLYHIEDHNGRHRLLKYTPQNMHCG
ATIWGPLTSPGTGFVAVQSVTRNNVNFRIAATGVVLNLDSSVNIVKKLKLIGYPYKIFKN
TSFIKGMFNTVLEVAKFEGASVRTVSGIRGQIKKALSSPPGAYRATFEDRLLMSDIVFLR
SWYPVAVPQLYNPVTSLLMPVGQKDGWTGMRTLGQLKQDLNVHHMPNKDSLYKEVSRNQR
HFNSLHIPKELQKALPFKSKPKQQQPKGKPGKDLQRPAAIREPHERKVAALLHALNTVHS
YKRKKAHVSQHAKHKVFLLEKKKMEEAKLKRQKEARKRVYRMVGQMEHRKKRSSLKG
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
aaaggtaaaacacagaagcgacaccagcacaaacaaagcgggccaaaggctgaaaagaag
aagctgagaaagcaagaaagctctacagaaaatgaaggccgacgaaaccccaaagcattt
gctgttcagtctgcagtacgcatggccaagaccttccacagggctcaagacctcaaaacc
agaaagcatcacgtccctggagttgaccgcagtccttctgaacctcctccagtgatgatc
gttgtggtcggacccccaaaagttggaaagagtaccctgatccgttgcctgatcaaaaac
tttactcgtcagaagctcggggagatatgtggccccgtaactgttgtctcagggaagacg
cgtcgtctgacttttgtggagtgcaataatgacattaacaccatgatcgaccttgcaaaa
gtagctgacctggttttaatgctgatcgacgccagcttcggctttgagatggaaactttt
gagttcctcaacatctgtcaggtccacggctttccccgtatcatgggagttctgacgcac
ctggattctttcaaaaacaacaaaacgctgaggaagaccaagaaaaacctcaaacatcga
ttctggaccgaggtctatcagggggccaagctgttctatttgtctggaatggtgtatgga
gagtatcagacccaggaagtgaagaacctcggccgcttcatcaccgtcatgaaggttcat
cccctggtgtggcagacctgccacccgtatgttctagcggaccgcatggaggacctgact
gaccctgagaggttaaggacagaccccaagagcgatcggacagtctctctttacggctac
ttgcgaggaacacacataaaaaatcagggccaagtccacatcccaggcgtcggagacttc
caggtgacggatataaacttcctgcctgacccctgtccactaccagacgctcaaaagaag
agagccttgaatgaaaaggaacgtttgctgtatgcaccaatggcaggcgtcggtgggctc
gtgtacgacaaggatgctgtctacattgaccttcctgccaaccacatcaatcaacaggag
gacgtgcgacccaccacagagctggtccagtctctgatcgacacacacaccactctggat
gccaagattgcaaaaagtaagatgtcgctgttcaaagactctgccaccctggactcgtca
ggctttgacaaccaaaacagtctaagatggaaagaaggtctccagcagaaagcctcagat
gcatttctgcgacaacaggaagtggctcctaatctgaggaagctggtttatgcttctgtt
gcagagaggacaaatcccgaagatgaagatcaggagctggggggcatgtttcgggtcagc
tgtcctcagaaaaccaaaaagcaccaagcgaatgctcttgactgctcccgcttttacacc
agcacctcccacgactggacttcagaggagatgatgaactccatcagggactgctttgtt
actgggaagtgggacgctacacaagatgcagctacgctactaaagcaggatgaggaactt
tacggtgactttgaagatctggaaacaggagaagtccacaaaggaggagacactgagcag
gatccagctgaaaatattgaatgtgatgaaactgaagaatgcatcaaagcggatgaagag
gagctccaaaaaaagcgtttggagaagaagcgcaaactcagagagctttttaatgaacgc
tatgacgacggcgatgccacgtacttggacgtcctgaaggaggaggggcagaagcaagga
gagctcaacagggcagagtttgagaacatggatgatgacgcgagggtgcaatacgaaggc
ttccggccaggaatgtacgtcagagtagagatctcctcggtaccgtgcgagtttgtcagc
aacttcgatccccactatcccataatcctcggaggcctgggctctagtgagagcagtgtt
gggtacctacagatgcgcctgaaaaaacaccgttggcacggtcgtatcctgaagactcgc
gaccccatcatcctgtcgctgggctggaggcggttccagacgatgccgctctaccacatc
gaggaccacaatggccgtcatcgcctgctcaagtacaccccccagaacatgcactgtgga
gccaccatttggggtccactgacttcacccggtactggttttgtggctgtacagtccgtc
acacgaaataacgtcaatttccgtatcgctgccacaggagtcgttttgaatctggattcc
tctgtcaacatcgtgaagaagcttaaactcattggttacccctacaagatttttaagaac
acttccttcatcaagggcatgttcaacacggtgttggaggtagcgaagttcgaaggggct
tctgtgcgaaccgtatcggggatccgaggccagatcaaaaaggctttgtcttcaccaccg
ggcgcttacagagccacgtttgaggaccgccttctaatgagtgacatcgtgtttctgcga
tcctggtatcccgtggctgttccccagctctataacccggtcacctccctgctgatgccc
gttggtcagaaggacggctggacgggtatgaggacgcttgggcagctgaaacaagacctg
aacgtccatcacatgcccaacaaagactctctttacaaggaggtttcccggaatcagaga
catttcaattcccttcacattccaaaggagctccagaaggctcttcccttcaagagtaag
cccaaacagcaacagcccaaagggaagccaggcaaagatctacagaggcccgccgctatc
cgagagcctcacgagaggaaggtggcagccctgcttcacgccctgaacacggtccacagc
tacaagagaaagaaagcccatgtttctcagcacgccaagcacaaggtgtttttactggaa
aagaagaaaatggaagaagccaagctgaagagacagaaggaggcacgtaaaagagtatac
cgcatggtgggacagatggagcacagaaagaagagatcgagtctcaaagga
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